Theobroma cacao (cacao): 18605917
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Entry
18605917 CDS
T02994
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18605917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18605917
03036 Chromosome and associated proteins [BR:
tcc03036
]
18605917
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18605917
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18605917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
18605917
NCBI-ProteinID:
XP_017973490
UniProt:
A0AB32W4H5
LinkDB
All DBs
Position
3:complement(30707340..30715098)
Genome browser
AA seq
1009 aa
AA seq
DB search
MFGSTNPFGQSSSSPFASQSVFGQTNNASTNPFAPKPSFGSPTPFGSQTGGSIFGGTSTG
VFGAAQSSSPFSSTTAFGASSSPAFGSSIPAFGSSSTTAFGSSSSSFGGSSVFGQKPAFG
FGSTPTQSSPFGSTAQQSQPAFGSGIFGSSTPFGSTQSAFGSSTPAFGATSTPAFGATST
PAFGATSTPAFGATSTPAFGSTGSPAFGSTGTAFGVSNAPVFGSGGTFGASSTPAFGTSS
TPAFGASSTPAFGASSTPSFSFGSSPAFAQSTSAFGSSPFGTTAFGAQSSPFGAQSSAPA
FGSTSFGQSPFGGQRGGSRVAPYTPTTEADSGSGTQPAAKLESISAMPVYKDKSHEELRW
EDYQLGDKGGPQPAAQPSGGIGFGVSTAPTSPFISSSTFGQTSANPFSGTSNNPFSIKPP
SFNSTGFTTSTTASNPFQSTSSSLFGPTSSTTPSIFSSSSTPTFGTGSSLFSSSITPSFS
TSPSIFGTGAAPTTTPAFATGLNFSSSQTSPLFNSTPAIGQTGNAFGQVSSTFGQNSSNF
GQTNIFNTPSTGFSGNLFSSSLSLAPSSNSAAFGPTTPSFASPFQPAPPAQTSGAFSFSN
FGQTQSGGGSGIFGQSNIGQSPATQSAAVVQPVTITNPYGILPAMPQMSIGRAGTAPSIQ
YGISSMPVVDKPAPIRISPLLTSRYLSQRRIRLPARKYRPNNDSPKVPFFSDDEETPSTP
KADAVFIPRENPRALVIRPTENWSSRASAEKASPLKDASTPVHENGKISDDGSNAEDEDK
NPAANGIAKERIHPVRGNQKANGVHDDHSAQKEDSYMTLSGHRAGEAAIVYEHGADIEAL
MPKLRRSDYYTEPRIQELAAKERAEPGYCRRVKDFVVGRHGYGSIKFLGETDVRRLDLES
LVQFNNREVIVYMDDSKKPPVGQGLNKPAEVTLLNIKCFDKKTGRQYTEGPKVEKYKEML
KRKAEDQGAEFLSYDPIKGEWKFRVNHFSAYKLEDEEEHYSETCAVSDC
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcaaccaacccttttgggcaatcatcaagtagcccatttgcatcccagtct
gtgtttgggcagaccaacaatgcaagtaccaatccatttgcacctaaaccttcctttggt
agtccaaccccttttggctcccaaacagggggttcaatatttgggggcacttctactgga
gtgtttggcgcagcgcaatcttcttctcccttttcctcaacaacagcctttggtgcctca
tcatctccagcttttggaagttccatacctgctttcggatcttcttctactactgccttt
ggcagttcatcatcatcttttggtggatcttctgtttttggacagaagcctgcatttggc
tttgggtctactcccacgcaatcaagtccttttggaagcacagcgcagcaatcacagcct
gcttttggtagtggtatatttggttcctccacaccttttggttcaactcagtctgcattt
ggttccagtactcctgccttcggtgcaacgagcacccctgccttcggagcaacaagcacc
cctgccttcggtgccacgagcacgcctgccttcggtgccacgagcacccctgcctttggt
tcaactggaagtccagcatttgggagcactggaactgcctttggtgtgtcgaatgccccg
gtttttggatcaggaggcacatttggagcatcaagcactcctgcttttggcacttccagt
actcctgcttttggtgcatcaagcactcctgcttttggagcatcttctactccttccttc
agctttgggtccagcccagcctttgcccaatcaacatcagcatttggtagcagtcctttt
ggaaccactgcatttggagcccagagttctcctttcggagcccaatcttctgcaccagca
tttggaagcaccagctttggccagtcaccttttgggggtcaacgtgggggaagtagggta
gcgccttacacacctacaactgaagcagatagtgggagtggtacacagccagctgcaaag
ttggagtcaatatcagcgatgcctgtatacaaagataaaagtcatgaggagctgagatgg
gaggattatcaattgggagataaaggtggaccccagccagctgctcagccttctgggggg
attggctttggtgtgtcaactgcaccaacaagtccttttatctcttcttcaacatttggt
caaacatctgcaaatcctttttccggcacgagtaacaatccatttagtataaaacctcca
tcctttaatagtacaggttttacaacctcaactactgcatcaaatccttttcaatcaaca
tcatcgagcctttttggcccaacttcgtcaacaacaccttcaatatttagttcttcttcg
actcctacatttggaactggttcatctctttttagttcatccatcactccttcattttca
acttcaccatccatttttggtactggtgcagctcccacaacaactccagcatttgctact
ggtttaaattttagcagcagtcagacatcccctctgttcaattctaccccagcaattggg
caaactggcaatgcttttgggcaggtgtcatctacctttggacagaatagtagtaacttt
ggtcaaacaaacattttcaatacaccttccactgggtttagtgggaatttgttttcaagc
tctctatcgctggctccttctagcaactcagctgcttttggcccaactactccctctttt
gcttcaccttttcagccagctccgcctgctcagactagtggtgctttcagctttagcaat
tttggtcagacgcaatcaggtggtggatcaggcatttttggtcagagtaatattggccaa
tcgcctgctacacagagtgctgctgtagtacaacccgtgactattacaaacccatatgga
atactccctgcaatgcctcaaatgtcaattggtcgggctgggactgcaccatctattcaa
tatgggatttctagcatgcctgttgtggacaaacctgctcctattagaatatcaccctta
ttgacttctcgatacctttcacaaaggcggattaggttgcctgcaaggaaatatcgtcct
aataatgatagtccaaaggttccatttttcagtgatgatgaagagacacccagcacacct
aaggctgatgctgtttttattcctagggaaaatccaagagctctggtcattcgtcccaca
gaaaattggtcttcaagagcttctgcagagaaggcatcaccattgaaggatgcatccact
ccagtgcatgagaatggcaaaatatctgatgatggctccaatgctgaggatgaagataaa
aatccagctgcaaatggcattgcgaaggagcgaattcatcctgtcagaggtaaccagaaa
gctaatggagtccatgatgatcattctgctcagaaagaggactcgtacatgacgctcagt
ggccatagagctggtgaggctgctattgtgtatgagcatggggctgacattgaggctcta
atgccaaagctccggcggtctgattactatacagaacctcgaatccaagaacttgcagca
aaggaaagggctgaaccagggtattgtcgccgtgttaaggactttgtggttggacggcat
ggttatggaagcatcaagttcctgggtgagacagatgtgagacgtcttgatctggagtcc
cttgtgcagttcaacaaccgtgaggtgattgtttacatggatgacagtaagaaacctcct
gttggacaaggtcttaataagccggcagaggtaacacttctcaacatcaaatgctttgat
aaaaagactggacgccagtatacagaagggccaaaagtcgagaaatacaaggaaatgctt
aagaggaaggccgaggaccaaggagcagagtttctgtcctatgatcccatcaaaggagaa
tggaagttcagggtcaatcacttcagcgcgtacaagctggaagacgaagaggaacattac
tcagaaacgtgtgctgtttcagattgctga
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integrated database retrieval system
