Theobroma cacao (cacao): 18606235
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Entry
18606235 CDS
T02994
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18606235
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Meiosis-specific proteins
Others
18606235
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
18606235
NCBI-ProteinID:
XP_007039794
UniProt:
A0AB32VG40
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Position
3:complement(32524519..32537285)
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AA seq
792 aa
AA seq
DB search
MEDDGGERSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSSSYQNTKTLLHFYDPM
MIIVPPNKLAPEGMVGVSELVDRFYASVKKIVMARGCFDDTKGAMLIKNLAVREPSALGL
DSYYKQYYLCLASASATIKWIEAEKGVIVTNHSLSVTFNGSFDHMNIDATSVQNLEIIEP
FHSALWGTNNKKRSLFHMLKTTKTVGGTRLLRANLLQPLKDIETINTRLDCLDELMSNEQ
LFFGLSQVLRKFPKETDRVLCHFCFKPKKVTNEVLVVENTRKSQMLISSIILLKTALDAL
PLLSKVLKDAKSFLLANVYKSICENEKYADIRKRIGVVIDEDVLHARVPFVARTQQCFAV
KAGIDGLLDIARRSFCDTSEAIHNLANKYREEFKMPNLKLPFNSRQGFYFSIPQKDIQGQ
LPSKFIQVVKHGNNVHCSTLELASLNVRNKSAAGECYIRTEVCLEALVDTIREDISVLTL
LAEVLCLLDMIVNSFSHTISTKPVDRYIRPEFTDDGPLAIDAGRHPILESIHCDFVPNNI
FISEASNMVIAMGPNMSGKSTYLQQVCLIVILAQIGCYVPARFATIRVVDRIFTRMGTMD
NLESNSSTFMTEMKETAFVMQNVSQRSLIVMDELGRATSSSDGLAIAWSCCEHLLSLTAY
TIFATHMENLSELATIYPNVKILRFDVDIRNSRLDFKFQLKDGPRHVAHYGLLLAEVAGL
PSSVIETARSITSRITDKEVKRMDVNCLHYNQIQLAYHVSQRLICLKYSNHDEDSIRQAL
QSLKESYIDGRL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgacggaggagagaggtcaagcttcgtgatcggtctcatcgagaacagagct
aaagaggttggagtggctgcctttgacttaagatcagcttctttgcatctttctcaatac
attgaaaccagcagctcatatcagaatacaaaaactttgcttcatttctatgatcccatg
atgatcattgttcctccaaacaaactggctcctgaaggtatggtgggagtatcagaacta
gtagatcggttttatgcttcagtcaagaagattgtcatggctcgtggttgctttgatgac
accaagggtgcaatgctgattaaaaatttagctgtcagagagccttcagcccttggtttg
gatagttactacaaacagtattatctttgcttggcttctgcttctgctacaatcaaatgg
atagaagcagagaaaggtgttattgtcacaaatcattccttatcggttacttttaatgga
tcatttgaccacatgaacattgatgctactagtgtccaaaacttagaaattattgaacct
tttcattctgcactttggggcacaaacaacaagaaaagaagtctattccacatgcttaag
acaacaaaaactgttggagggactagacttcttcgtgccaatcttttgcagcctttaaaa
gatatcgaaactatcaatacgcgtctggattgcctggatgagttgatgagcaatgaacag
ctattctttggactgtctcaggtcttgcgaaagttcccaaaggagactgatagggtactt
tgtcatttctgcttcaagccaaagaaagtaacaaatgaagtcttggttgtggaaaacact
agaaagagccaaatgctgatatcaagcatcattcttctcaaaactgcattagatgccttg
ccgttactatcaaaggtgcttaaggatgcaaaaagttttcttcttgcaaatgtttacaag
tctatatgtgaaaacgagaaatatgctgacattagaaagagaattggagtggtgattgat
gaagatgtgcttcacgcacgggttccttttgttgcccgcacacagcagtgttttgctgtc
aaggctggcattgatgggctattggatatagctcggagatctttttgtgataccagcgaa
gctatacataaccttgcaaacaagtaccgggaagaattcaagatgccgaatctgaaactc
ccatttaacagtagacaaggtttttactttagcattccacagaaagacattcagggacag
cttcccagcaagttcattcaggttgtgaaacatgggaataatgtacattgttcaactttg
gaacttgcttctctgaatgtcagaaataaatctgcggctggagagtgttatatacgaaca
gaagtttgcttggaagccctagttgataccataagggaggatatctctgtgctcacactg
cttgctgaagtcctgtgcctgttagatatgattgttaattcattttctcatacaatatca
accaagcctgttgaccgatatattaggccagaatttactgatgatggccctctggcaatt
gatgctggtagacaccccatcctagaaagcatacactgtgattttgtgcccaacaacatc
tttatttcagaagcatcaaacatggttattgcaatggggccaaacatgagcgggaagagc
acttatcttcaacaagtgtgtctcatagttattcttgctcagattggttgctatgttcct
gcccgctttgcaacaattagagtagttgatcgtatatttacaaggatgggcacaatggat
aatcttgaatcaaactctagtacgtttatgacagagatgaaagagactgcttttgtcatg
cagaatgtctcccaaaggagtctgattgttatggatgaacttgggagggctacttcgtcc
tctgatggattggcaatagcatggagctgctgtgaacatctgctatcactcactgcgtat
accatatttgctactcatatggagaacttgtcagaattagctaccatctatccaaatgtg
aaaattcttcgcttcgatgttgatattagaaacagccgcctagattttaagtttcaactc
aaggatggaccaaggcatgtagcacactatggccttctactagcagaagtggcaggatta
ccgagttcggtgattgaaacagccagaagcataacatcaaggattacagacaaggaagtg
aagcgaatggatgtaaactgcctgcactataatcaaatacagttggcatatcatgtttct
caacgactgatatgcttgaagtactccaaccatgacgaggactccatccggcaggcattg
caaagtctcaaagagagctacattgatggtaggctctaa
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