Theobroma cacao (cacao): 18606253
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Entry
18606253 CDS
T02994
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18606253
Membrane trafficking [BR:
tcc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
18606253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Baculo_VP39
Motif
Other DBs
NCBI-GeneID:
18606253
NCBI-ProteinID:
XP_007039830
UniProt:
A0AB32VC19
LinkDB
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Position
3:32651851..32659381
Genome browser
AA seq
1396 aa
AA seq
DB search
MASNPPFQVEDQTDEDFFDKLVNDDDDDENMVPTVPKFTEGNESDDARAFANLAIGEDSG
GEADNYDEKEKDPVDAGPAPVNAQAGEDGCDSLGLDNRVIDSNNHREVRAGSEVGFDPNI
SKNNGSMNSGVKEVGWNSFYADSDENGVNGVGSYSEFFNDLGENPTGDFPGEVDENAKPG
ALDQNSVSSYGQYHDGGQVYGASTVDNGNEQDLNSSQYWENMYPGWKYDANTGQWYQVDG
YEGNLQGGYESSGGDGSGTTDVKAGVSYLQQAVQSVAGTMATAESGATESVTNSNQVSQV
NNGYPEHMVFDPQYPGWYYDTVAQEWRTLESYDASVQSSLQSTVQGYDQQNQNGFASAGG
HSQSNCSSVYGKYGLGDNYGSQGLGSSGEHGNWGDSYGNYNSQGLNMWQPGTAAKTEAVS
SFAGNQQLDTSFGSNMSVNSRANHLKSSYNSLQEVQLLNKASQVHTEVNGVVGFRSFVPS
ENFNHQFNQANLKQSEQMHFSNDIYGSQNSVNVSQQPLQSSHQFSYASNTERSSAGRPPH
ALVTFGFGGKLIVMKDSSPLLNSSFSSQDSVGASITVLNLLEVVNGNSNGSGAALAASDY
FRTLCQQSFPGPLVGGNAGSKELNKWIDDRIANCESPDMDYKKGEVLRLLLSLLKIACQH
YGKLRSPFGADTVLKETDTPESAVAKLFASAKRNDTPYGALSHCLQQLPSEGQIRATASE
VQHLLVSGRKKEALQCAQEGQLWGPALVLASQLGDQFYVDTVKLMALHQLVAGSPLRTLC
LLIAGQPAEVFSTGTSVDGIDMSQQHAQLGANCMLDDWEENLAVITANRTKDDELVIIHL
GDCLWKERSEITAAHICYLVAEANFESYSDSARLCLIGADHWKFPRTYASPEAIQRTEFY
EYSKVLGNSQFILLPFQPYKLIYAHMLAEVGRVSDSLKYCQAVLKSLKTGRAPEVETWKQ
LVLSLEDRIRIHQQGGYAANLAPAKLVGKLLNFFDSTAHRVVGGLPPPAPSASNGNSQVN
DQFHQQSGPRVSSSQSTMAMSSLMSSASMEPISDWAGRAVDGRMTMHNRSVSEPDFGRTP
RQVDSSKEAVASTAQGKASGLGGASRFARFGFGSQLLQKTVGLVLRPRTDKQAKLGEKNK
FYYDEKLKRWVEEGAEPPAEEAALPPPPTTAAFQNGTSDYNLKSALKSEGSPPNGSPKFR
NPTPIEHASGIPPIPASSNQFSARGRMGVRARYVDTFNQGGGGQANLFQSPSVPSVKPAV
AANAKFFIPTPASTNEQTMEAISESAQEENTTSNNPTKSNANESFQSPTPLSSMTMQRFP
SMDNLAQKGIMRNANGFPPHSRRTASWSGGNLADAFSPPGKAEIRPLGEALGMPPSSFMP
SPTNGSFGDELHEVEL
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaatcctccattccaggtggaggatcagacggatgaagatttctttgacaag
ttagttaatgatgatgatgatgatgagaacatggttcccaccgtccctaaattcacggag
ggtaacgagtccgacgacgccagagccttcgccaatttagcaatcggcgaagattctggc
ggcgaggctgacaattacgatgaaaaggaaaaagatcctgtggatgcaggtccagcaccg
gtcaatgcacaggcaggtgaagacggttgtgattcattaggtcttgataatcgcgtgatt
gactcgaataatcatcgagaagtaagggccgggtcagaggttggatttgatccgaatata
agtaagaacaatggatctatgaattctggggttaaggaagtagggtggaattcgttttat
gcggattctgacgagaatggggtgaatggagttgggtcatattccgaatttttcaatgat
ttaggggagaatcccacaggagatttccctggtgaagtggatgaaaatgcaaaaccgggt
gcattggatcaaaattctgttagtagttatgggcagtatcatgatggcgggcaagtttat
ggagcttctaccgtagataatggaaatgaacaagatttgaacagcagtcagtactgggag
aatatgtatccaggatggaagtatgatgctaatacagggcagtggtatcaggtggatggc
tatgaggggaaccttcaagggggttatgagagttcaggtggtgatggcagtgggaccacg
gatgtgaaagcaggggtttcttatttgcaacaggcagttcagtctgttgcagggactatg
gcaactgctgagagtggtgccacggagagtgtgacaaattcaaatcaggtttcacaagtg
aataatgggtacccggaacatatggtttttgaccctcaataccctggttggtattatgac
acagttgctcaagaatggcggacattggagagctatgatgcctctgttcaatcatctctt
cagtcaacggttcaaggttatgatcagcaaaatcaaaatggatttgcttctgctggtggg
cattctcaaagtaactgttctagtgtgtatggtaaatatggactgggagataattatggg
tcacaaggtcttggaagctctggtgaacatggtaattggggtgactcctatggtaattat
aatagccagggtttgaatatgtggcaaccagggactgctgccaaaactgaggcagtttca
agttttgctggcaaccagcaattggatacatcttttggttcgaatatgtctgtgaacagc
cgtgcaaatcatttgaagtcatcctataattctctgcaggaagttcagttgctcaataaa
gctagtcaggttcatactgaggtcaatggagttgttgggtttaggagttttgtccctagt
gaaaacttcaatcaccagtttaatcaggcaaatttaaagcaaagcgagcagatgcatttc
tcgaatgatatctacggaagccagaactctgtcaatgtttcccagcagccgcttcagagt
agccatcagttttcttatgcttccaacacagagagatcatcagctgggcgtcctccacat
gcacttgttacttttggttttggtggaaaactgatagtaatgaaagatagtagtcctctg
ctgaactcgtcatttagcagccaggattctgtaggagcctctatcaccgttctcaatttg
ttggaagttgtcaatggaaactcaaatggttctggtgctgcactggcagcttctgattat
ttccgtactctgtgccaacaatcctttcctggtccattggttggtggaaatgcaggcagt
aaagagttgaacaagtggattgatgacagaattgccaactgtgaatcacctgacatggac
tacaaaaagggtgaagttttgaggctgcttctctcattgcttaaaatagcttgccaacat
tatggaaaactccggtctccttttggtgctgacactgtattgaaggagactgatactcca
gaatcagcagttgcaaaactctttgcatctgcaaagaggaatgacacaccttatggtgct
cttagccactgcttgcagcaattgccttctgaaggacaaattcgggcaaccgcttctgag
gtacagcatcttctggtttctggtagaaagaaagaggctctacaatgcgcacaagaaggt
cagttgtggggacctgcacttgttctcgcatcacaactgggcgatcagttctatgttgat
actgtgaagctaatggcacttcatcagctggtagcagggtctcctttgcggacattatgc
ttgctaattgcagggcaaccagcagaagttttttccacaggcacctcagttgatggcata
gatatgtctcaacagcatgcacagttaggggctaattgcatgcttgatgattgggaagag
aatttggctgtaataactgcaaacagaaccaaggatgatgagcttgtgattattcatctt
ggagattgcctgtggaaggaaagaagtgagataactgcagcacacatctgttacttagtt
gcggaagcaaactttgagtcatattcagatagtgctagactttgtcttattggagcagat
cactggaagtttccccgaacttacgctagtccagaggctatccagaggactgagttttat
gaatattcaaaggtactgggaaactctcagtttatcctgctaccatttcagccatacaag
cttatttatgcacacatgctggctgaagttggaagagtttcagattcattgaagtactgt
caagctgtattaaaatctctgaaaactggtcgagcgcctgaggtagaaacttggaaacaa
ttagttttatctcttgaggacaggataagaatccatcaacagggtggatatgctgcaaat
ttggctccagcaaaattagttggtaaattgctcaacttttttgatagcactgctcatcgt
gttgttggtggtctaccaccaccagctccatcagcatcaaatggaaattctcaagttaat
gatcagtttcaccagcaaagtgggccaagagtatcatctagtcaatcaacaatggccatg
tcttctttgatgtcatctgcctcaatggaacctataagtgattgggctggcagggcagtt
gatggcagaatgacgatgcataatagaagtgtttcagagccggactttggcagaactcca
agacaggttgattcatcaaaggaagctgtagcatccactgcacaaggcaaagcatcgggc
ttgggaggggcatctcgctttgctcgttttggttttggctcacagcttttgcagaagact
gtggggctagtcttgaggcctcgtacagataagcaggctaaattgggtgaaaagaacaaa
ttctactatgatgaaaaactcaagagatgggtggaggaaggtgctgaacctccagctgaa
gaagcagccttgccaccacctccaaccaccgcagcattccagaatggaacgtctgactac
aacttgaagtctgcattgaagagtgaggggtctccccctaatgggagcccaaaattcaga
aatccaaccccgatagaacatgcttctgggatcccacctattcctgccagctccaatcaa
ttctcagctcgtggtcgaatgggtgttcgagcaaggtatgtggacactttcaaccaaggt
ggtggaggccaagcaaatttatttcaatcacctagtgttccctctgttaaacctgcagtg
gctgcaaatgcaaagttctttattcccacgcctgcatcaacaaatgaacaaacgatggag
gcaatatcagaaagtgcacaggaagaaaatacaactagtaataatcctacaaaatccaat
gccaatgagtcttttcagtctcccacacctttatcatcaatgactatgcaaaggttccct
agcatggataatcttgctcagaaaggcattatgagaaatgccaatggttttccaccgcac
tcacgacgaacagcctcatggagtggtgggaacttggctgatgcatttagtcctcctggt
aaggcggaaatcagacctttaggggaggcactgggaatgcctccatcttcatttatgccc
agtccaacgaatggtagttttggggatgagctacatgaggtggaactttga
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