Theobroma cacao (cacao): 18606501
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Entry
18606501 CDS
T02994
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
18606501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18606501
03051 Proteasome [BR:
tcc03051
]
18606501
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
18606501
Proteasome [BR:
tcc03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
18606501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
18606501
NCBI-ProteinID:
XP_007040191
UniProt:
A0AB32VC42
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Position
3:complement(34004360..34007164)
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AA seq
611 aa
AA seq
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MEDSGAPAPNPNPAPCWSNVLKSQPPKPQTQKQTAATTQLFVESCKSTKGIAVAVVDANA
VIEGGEKLNNSADRFVTVPEVLAEIRDPVSRHRLAFIPFSIDSMEPSSDALNKVIKFARA
TGDLQTLSDVDLKLIALTYTLEAQIHGTNHIRDAPPPVHVVNVKRLPERDLPGWGSNVPN
LDEWEALEREAEGGTNSNSRILPLKDLNMNTLPSDNGSEDGSVEIKSETHSENQEDVEHG
FRRPRRYLPQKKEVKIEGKKMVADGIDASQGQIDDNGDNWQPAVSRSTHRRYLRRKARRE
YYEALVEKDCQEDMEKSMDKNHVEDAHSGNGILEETERAEEKKGDEDLSSILKQMRLEED
SLEALQEAEEVEITVEANVNLSVEGNKMDLVNEELDQLEMSSQTNETVDASYTDDVSSEQ
SWMLRSLSESSVACVTGDFAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYNVTAEI
GRIFCPKCGNGGTLRKVAVTVGENGIVLASHRPRISLRGTKFSLPLPQGGRDAITKNLIL
REDQLPQKFLYPKTKKKVNKQGDDDLFMGVDTFTHHTDKRAPLQPPVRKALAVFSGKRNP
NDNHYSRSKHK
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggaggattccggagcaccggcccctaacccgaacccggcaccatgttggagcaacgta
ctgaagagccaaccaccaaagcctcaaacgcaaaaacaaacggcggcgacaacccaactc
tttgtcgaaagctgcaaatccacgaagggaatagcggtggccgtagttgacgccaacgcc
gtcatcgaaggtggagaaaagctcaacaactccgccgacaggttcgttaccgtccctgaa
gtcctcgctgaaattcgcgaccctgtttcccgtcaccgcctcgcctttatccctttctcc
attgattccatggagccctcttccgatgccctcaataaagttatcaaatttgcgagggca
actggtgacttgcagactctttcggacgttgatctcaaactgattgccctgacatatacg
ttggaggctcaaattcatggaaccaatcatattagagatgctcctcccccagttcatgtt
gttaatgtaaagaggctacctgaaagggacttgcctggatggggctccaatgttcctaat
ttggatgagtgggaagcactcgaacgtgaagctgaaggtggaacaaattctaactcgaga
atccttcccttgaaagacttaaatatgaatactctcccttcggataatggttctgaagat
ggctctgtggaaataaagagtgaaacgcattctgagaatcaagaggatgttgaacacggt
tttaggagacctaggagatatttaccccagaagaaagaggtgaaaattgaagggaagaag
atggtggctgatggaattgatgcatctcagggacagattgatgataatggtgataattgg
caacctgctgtaagtcgaagtactcataggagatatcttaggaggaaagctaggcgggaa
tattatgaggcattagtggagaaagattgtcaggaagatatggaaaaaagcatggataag
aaccatgttgaagatgctcattctggaaacgggattttggaggagactgagagagcagaa
gaaaagaagggtgatgaagatctttcttcaatcctaaaacaaatgaggctggaagaagac
tcactggaggctcttcaagaagcagaagaagtggagatcacagtggaggccaatgtgaat
ctttctgttgaaggaaataagatggatcttgtgaatgaagaattagaccagttggaaatg
tcaagtcagaccaatgaaaccgttgatgcatcatatacagatgatgttagcagcgagcag
agctggatgttgagatccctatctgagtccagtgtagcttgtgtaactggtgactttgct
atgcaaaatgttattctgcagatgggtttacggttactagcacctggcggaatgcagatt
cggcagctacacaggtggatattgaagtgccatgcctgctataatgtgactgctgaaatt
ggaaggattttctgtcccaagtgtggaaatggaggaactttacgtaaggtagctgttact
gttggtgagaatggaattgttttagcatcccatcgcccaagaatttctcttcgcggtaca
aagttttcactgcctttaccccaaggtggaagagatgccataaccaaaaacctcatttta
cgtgaagatcaacttccccaaaaattcctttaccctaaaacaaagaagaaagtaaataaa
cagggggatgatgatcttttcatgggtgtggacactttcactcaccatactgataaaagg
gcacctctccagcctcccgtaagaaaagcattagcagtatttagtggaaagaggaatcca
aatgacaatcactactcccgttctaagcataagtaa
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