Theobroma cacao (cacao): 18606553
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Entry
18606553 CDS
T02994
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18606553
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tcc01009
]
18606553
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18606553
Protein phosphatases and associated proteins [BR:
tcc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
18606553
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
SR proteins
18606553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
18606553
NCBI-ProteinID:
XP_007040292
UniProt:
A0AB32VGS1
A0A061G5X1
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All DBs
Position
3:complement(34282559..34285582)
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AA seq
200 aa
AA seq
DB search
MSYSRETRSVSPARGRRSRSLSRSRRSRSRSRSRSQDASNPGNNLYVTGLSTRVTTADLE
KYFGNEGKVVECHLVTDPRTRESRGFAFVTMETVEGAERCIKYLNRSVLEGRLITVEKAK
RSRGRTPTPGRYHGLRDRRGQGRRRSRSYSPRRYDRDYHSRGRQGRSRSRSPYGRKRDDY
DSYRRRRERSLSGDGSGYRR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtcttattcaagggaaacaaggtcagtttcaccggcaagaggacgccgatcaaggtca
ttgtcaaggtcccgacggagccgctccaggtctaggagccgatctcaggatgcatccaat
ccagggaataacttatatgtgactggcttatccactagggttactactgccgatcttgag
aagtattttggcaatgaaggaaaggttgtggagtgccatctggttacagatcctcgcacc
agagaatctcgtggatttgcctttgtgaccatggaaactgttgagggtgcagaacgctgc
atcaagtatttgaatcgatccgtgcttgaaggtcgattgatcactgtggaaaaggcaaaa
aggtccagaggaagaacaccaactcctgggaggtatcatggtctgagagatagaagagga
caaggtcgcagacggtctcgtagctactcacctcgacgatatgatagagattatcattca
aggggcaggcaagggagatcacgctctcgttccccctatggtaggaaaagagatgattat
gactcatacaggaggcgcagagagcgctccttgtccggcgatggcagtggttatcgtaga
tga
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