Theobroma cacao (cacao): 18606792
Help
Entry
18606792 CDS
T02994
Name
(RefSeq) heat stress transcription factor A-1d
KO
K09419
heat shock transcription factor, other eukaryote
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18606792
Transcription factors [BR:
tcc03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
18606792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
AFAP_C
TMF_TATA_bd
Herpes_UL25
Seadorna_VP6
Dna2
Motif
Other DBs
NCBI-GeneID:
18606792
NCBI-ProteinID:
XP_007040660
LinkDB
All DBs
Position
3:35464272..35470670
Genome browser
AA seq
528 aa
AA seq
DB search
MDGMSSSSNGQNDASTTGGGAQTEAQPQPTPQPVAVQSANAPPPFLSKTYDMVDDPATDA
IVSWSPTNNSFVVWNPPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGF
LRGQKHLLRNISRRKPAHGHGHQQTQQSHGQSSSVGACVEVGKFGLEEEVERLKRDKNVL
MQELVRLRQQQQATDNQLQTVVQRLQGMEQRQQQMMSFLAKAVQSPGFLAQFVQQQNESN
RRITEANKKRRLKQDGIIDNEHSASSDGQIVKYQPMMNEAKALLRQFMKGDASPRMDSFN
NNNENFLIGDGLSSSSGIDGGNSSIRVSGVTLQEVPPTSGQSTYIPATSEISGHCPSTAI
TEVQSSPSETTSEKITTAQFPDLSALAGVQKPPSISVSQTDIIMPELSQIPDMVPESIVD
IPTENYMGSETGNGGFIDPATFVVDGSVPIELDDIAPDPDIDALLDNSTFWADLLVHSPL
PDDIESPSMDGKSKGNEGQPIDNGWDKSQHMDKLTEQMGLLRSDNKGV
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatgagtagcagtagcaacggccaaaacgatgcatcaaccaccggcggagga
gcccaaacggaggcgcaacctcaaccaacgccgcagccggtggcggtgcagagtgcgaac
gcgccaccgcctttcctgagcaagacttatgatatggtggatgatcccgccaccgatgcc
atcgtttcttggagcccaaccaacaacagcttcgttgtttggaacccgccggagttcgca
cgggatcttctgcccaagtatttcaagcacaacaacttctcgagcttcgtcaggcaacta
aacacctatggtttccgaaaggttgatcctgaccgctgggaatttgcaaatgagggattt
ttaaggggtcagaagcacctgcttcggaatattagtcggcgaaagcctgcccatgggcat
ggccatcagcagacacagcaatcacatggacagagttcatctgtgggtgcctgtgttgag
gttgggaagtttgggcttgaagaagaggttgagaggcttaagagagacaagaatgtgctt
atgcaggaacttgttaggttgaggcagcagcaacaggctactgataaccagctgcaaacg
gtggtgcaacgtcttcaggggatggagcagcggcagcagcagatgatgtcattcttggca
aaggctgtgcagagccctggctttttggctcaatttgtgcagcagcaaaatgagagcaat
aggcgcataactgaagcgaacaagaagaggaggctcaagcaggatggtatcattgataat
gagcattccgcttcctctgatggacagattgttaaatatcagcctatgatgaatgaggcg
aaagcactgctcaggcagttcatgaaaggagatgcttctcctaggatggactcttttaac
aacaataatgaaaattttctgattggtgatggtttgtcatcttccagtggaatagatggt
gggaactcttcaatccgtgtatcaggggtgactcttcaagaggtcccaccaacttcaggc
cagtcaacatatataccagcaacttcagagatctcagggcattgcccctcaactgccata
actgaagtacaatcttccccaagtgaaacaacctctgaaaagattacaacagcacagttt
ccagatttgagtgcactggctggagtgcaaaagccaccatcaatatccgtttctcagaca
gatataattatgcccgagctttctcaaataccagacatggtcccagaaagcattgttgat
attccaacagaaaattacatggggtctgaaacagggaatggtggatttattgatcctgct
acatttgttgtggatggctcagttcccatagaacttgatgacattgctcctgatcctgac
atagatgccttgctggataattctactttctgggctgaccttcttgtgcacagtccattg
cctgatgatattgaatcaccctcaatggatggtaaaagcaagggaaatgaagggcagccg
attgacaatggatgggacaaatctcagcatatggataagcttacagaacaaatgggtctt
cttagatcagataacaagggggtttaa
DBGET
integrated database retrieval system
