Theobroma cacao (cacao): 18607067
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Entry
18607067 CDS
T02994
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18607067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18607067
04121 Ubiquitin system [BR:
tcc04121
]
18607067
03036 Chromosome and associated proteins [BR:
tcc03036
]
18607067
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18607067
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
18607067
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
18607067
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
18607067
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
18607067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-C3HC4_2
BRCT_2
zf-HC5HC2H
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-RING_6
zf-C3HC4_3
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
RTT107_BRCT_5
zf-RING_10
zf-Nse
Motif
Other DBs
NCBI-GeneID:
18607067
NCBI-ProteinID:
XP_007041105
UniProt:
A0AB32VDR2
LinkDB
All DBs
Position
2:580499..585935
Genome browser
AA seq
1002 aa
AA seq
DB search
MGDPSHLEKMGRELKCPICLGLLNSAVSLTCNHVFCNACIMKSMKSGSNCPVCKVPYQRR
EVRPAPNMDSLVSIYKSMEIASGFNIFVTQNQPQDKPSDDEKQLENDLNCSERVDDQGAT
KRRGSRVDKSTTVNSDPISVKPSFPTNKRVQVPQYPHTEMHMSAAKLGSGLAESTKDESK
SSLIVQKENYVLKDKEELILAPFFWLREEDVEKSSQLTDGDQFAYITPPEVPSFSDIKDS
DDEGSSKEEVQGNIGHVNFFDSEMFEWTQRACSPELLPSPVKMQVADTDELALQGANTVE
PYINNGACMTTRHDTSEEMLPNMPSSRNKTIGNKIRNQKSRQIGRKGRKTAQKKIAERTT
SPVWKNYADPGKLSEGFNQNQAADNSGSSYLAKTRKNNKVAGLDHHETEPIATYVSAASG
NADTPNQDETQMVKKLPARASKKKCGDEYENLTTGKSCRRITGQCQKKSCSKSKKQKPSL
AIVDFPEEVSTAHNQTNEKMILRNSFSIPVANDNGVKQLSEGSIKRAREAKSALSSKSEK
NTSCKKKMKVSFTDDTKGWLAEEHQLGNSNVSTGRLSEQVQGSPTVGISDGSTAKKLPGA
NGMALRKCETVTNKTQCAFCLSTEESEASGQMVHYYDGRPVPLDYNGGSKVIHSHKNCTE
WAPNVYFENDKAINLEAELSRSRKIKCPCCGLKGAALGCYEKSCRKSFHVPCAKLISECR
WDTENFVMLCPLHASSKLPNENSESQESRKRRVLRGHSPIHHNQVPTNNGISVQKKWNPC
GSPNKLILCCSALTVGEREIISEFEKLSGVTVLKKWDSSVTHIIASTDENGACKRTLKIL
MGILEGKWILNINWVKACIKAMKPVDELQYEITLDVHGIRDGPQLGRLRFLNKQPKLFDG
SKFYVMGDFEPSYRGYLQDLVVAAGGTILHRKPISGDQGAPVSSTFIIYSLELPEKCDPG
KKHMILSRRQSDAEALASSTGAKALSNTWLLNSISACKLQNL
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgggggatccaagtcacctggagaaaatgggcagagagctcaaatgccccatttgcttg
ggtctgttgaattctgccgtttcacttacatgcaaccacgtattctgcaatgcctgtata
atgaaatcaatgaaatcaggttccaattgtccggtttgcaaagtgccctaccagcgtaga
gaggttcgtccggctcctaacatggatagcttggttagcatttataaaagcatggaaatt
gcttcaggtttcaatatttttgtcacccagaatcagcctcaggataaaccatcagatgat
gaaaagcaacttgaaaatgatctcaattgtagtgaaagagtggatgatcagggagcgacc
aaaagaagaggatcgagggtggataagtccacaactgtgaattctgatcccatttctgtg
aagccttcttttcctaccaacaaaagggttcaggtgccacaatatcctcatacagaaatg
catatgtcggctgcaaaacttggaagtggattggctgaaagcaccaaggatgaatctaaa
agcagtttgatagttcaaaaggagaattacgttctaaaagataaggaagaattaatactt
gcaccctttttctggttgagggaggaagatgtagagaagtcaagtcagcttacagatggg
gatcaatttgcgtatataacaccacctgaagttccttctttcagtgatattaaggattct
gatgatgaaggctcctctaaagaggaggtgcagggaaacattggtcatgtgaatttcttt
gatagcgaaatgtttgaatggacacagagagcttgttcccctgaacttcttccaagtcct
gttaaaatgcaggttgcagacactgatgaactagcactacaaggtgcaaatacagttgaa
ccctatattaataatggtgcatgcatgacaacgagacatgatacatcagaagaaatgctg
cctaatatgccatcttccagaaacaagactattggtaataagattaggaatcaaaaatcc
aggcaaataggtaggaaaggtagaaagactgcccaaaagaagattgctgaaagaactacc
agtcccgtttggaaaaattatgctgatccaggaaaactatctgaaggttttaatcaaaac
caagcagctgacaatagtggcagttcttatttggctaagactaggaaaaataataaggtg
gctggtttggatcaccatgaaactgaaccaatagcaacatatgtttctgctgcctctgga
aatgcagatactcctaaccaggatgaaacacaaatggttaagaagttgcctgccagagcc
agtaagaaaaaatgtggtgatgaatatgagaatttgacgactggaaaaagttgcaggagg
atcactggccagtgccaaaagaaatcttgttcaaagtcaaagaaacaaaaaccaagtttg
gctatagttgatttccctgaagaagtttcaactgcacacaaccagacaaatgaaaagatg
attcttcggaactctttttccattcctgtagctaatgacaatggtgtcaaacagttaagt
gaaggatcaatcaaacgtgctagagaagcaaagtctgctttgagttcgaaaagcgagaaa
aacacaagttgtaagaaaaagatgaaagtttcttttactgatgacacaaaaggttggttg
gccgaagagcatcagctgggaaatagcaatgtttctactgggagattaagtgaacaggtt
caagggagtcctactgttggaatttcagatggttcaacagcaaagaagcttcctggtgca
aatggaatggccttgcgcaaatgtgagactgttacgaataaaacacaatgtgctttctgt
ctttctacagaagagtctgaggcctcaggacagatggttcattattatgatggcaggcct
gttcctctagattacaatggtggctcaaaggtcatacattcacacaagaactgcactgaa
tgggcacctaatgtttattttgaaaatgataaggcaatcaaccttgaagctgaattatcc
agaagtcgaaaaataaaatgcccctgttgtggactcaaaggtgcagcgttgggctgttat
gaaaagagttgccgcaagagttttcatgttccttgtgcaaaattaatctcagaatgccgg
tgggacactgaaaactttgtaatgttatgccctcttcatgcctcgtctaagttgcctaat
gaaaattcagaatctcaagaaagcagaaaaagacgtgttttgagaggacattctcccatt
caccacaatcaagttcctacaaacaatggcatcagtgtgcagaagaaatggaatccttgt
ggatcacccaacaaattgattctctgttgttcagctcttacagttggagagagggaaatc
atatctgaatttgagaaattatctggggttacagtgttgaagaaatgggattcaagtgtg
acccatatcattgcatccacagatgaaaatggagcatgcaaaagaacccttaaaatttta
atgggtatcttggaggggaagtggatactgaatattaattgggtcaaagcttgcattaaa
gccatgaaacctgttgatgagttacaatatgaaattactcttgatgttcatggaatcagg
gatggtccacaacttggcaggctgaggttcctgaacaagcaaccaaagcttttcgatggg
tctaagttctacgtgatgggagattttgaaccttcttataggggatatctacaagacctt
gtagttgctgcaggaggcaccattttgcatagaaaacccatttcaggtgatcagggagcc
cctgtgtcttcaaccttcataatttacagccttgagttgcctgaaaaatgtgatccaggc
aagaagcatatgattttaagccgcaggcaatctgatgctgaagctctggcaagttcaacc
ggagccaaagcattaagcaatacgtggcttttgaactccatctctgcgtgcaaattgcaa
aatctctaa
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