Theobroma cacao (cacao): 18607363
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Entry
18607363 CDS
T02994
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18607363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18607363
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
SR proteins
18607363
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
18607363
NCBI-ProteinID:
XP_007041544
UniProt:
A0AB32VH32
LinkDB
All DBs
Position
2:complement(2092005..2096249)
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AA seq
236 aa
AA seq
DB search
MAGRSSRTIYVGNLPLDIKEWEIEDLFYKYGRVLDIELKLPPRPPGYCFVEFEDPLDAED
AIKGRDGYNFDGCRIRVELAHGGRGQSSRRGYGGSGGSGGRGRFGTSHRSEFRVVVRGLP
SSASWQDLKDHMRKAGDVCFTEVYRDGDGAMGIVDYTNYDDMKYAIRKLDDSEFRNPFAR
AYIRVKCYEGSPRGGRSRSRSRSGSPRSNRRSVSKSRSPSPARLSRSRSRSRSRSN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggctggtcgttcttcccgcaccatatatgttggtaacctaccgctagatatcaaagag
tgggagattgaagatctattctacaagtatggacgtgttttggatattgaattgaagctt
cctccccgccctcctggttactgtttcgtggagtttgaggaccctttggatgctgaagac
gcaattaagggtcgagatggctataattttgatgggtgtcgtatccgggttgaactagcc
cacggtggtagagggcaatcttctcgacgtggatatggtggtagtggtggcagtggtggt
agaggacgatttggtacttcacatcggtctgagtttcgagttgttgttcgtggattgcct
tcttcagcttcatggcaagatctgaaggatcacatgcgtaaggctggagatgtatgcttt
acagaagtttatagggatggtgatggagcaatgggtattgtggactacaccaattatgat
gacatgaaatatgcaatcaggaaacttgatgattctgaatttcgaaatccttttgcaagg
gcttatatcagagtgaaatgctatgagggtagtccgcgtgggggtcgaagccgaagtaga
agtcgaagtgggagtccaagaagcaataggaggtctgtatcaaaatcgaggtcaccctca
cctgccagattatccagatcaaggtcaaggtcaaggtcaaggtcgaactga
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