Theobroma cacao (cacao): 18607476
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Entry
18607476 CDS
T02994
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00900
Terpenoid backbone biosynthesis
tcc01100
Metabolic pathways
tcc01110
Biosynthesis of secondary metabolites
Module
tcc_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
18607476
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tcc01006
]
18607476
Enzymes [BR:
tcc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
18607476
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
18607476
2.5.1.29 geranylgeranyl diphosphate synthase
18607476
Prenyltransferases [BR:
tcc01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
18607476
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
18607476
NCBI-ProteinID:
XP_007041720
UniProt:
A0AB32VIF4
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All DBs
Position
2:2613642..2615843
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AA seq
341 aa
AA seq
DB search
MLAFSTVITSGPNLYLPKKPRNFHFPIRCLSSTSLSASSQPSKLTQFDLKTYWTTLIAEI
NQKLEEAIPVKYPEQIYEAMRYSVLAKGAKRAPPVMCVAAYELFGGNRLAAFPTACALEM
VHTASLIHDDLPCMDDDPVRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSQTPTELVP
EARILRVIAEIARTVGSAGMAAGQFLDLKGDANSVDFIQEKKYGEMSECSAVCGGLLAGA
EDDEIERLRRYGRAVGVLYEVVNDVLEAKLVEKEETEKNQKKGKSYVSMYGVKKAMEVAE
DLQTKSKGELDGFDKYGESVAALYSFIDYAFYRDFNVDDLS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgttggctttttcaacagtgataacatcagggccaaatctataccttccaaagaaaccc
cggaattttcacttcccaattcggtgcctttcttcgacatctttatcagcttcgagccaa
ccatcaaagttgacccaattcgatttaaagacttactggactacccttatagcagaaatc
aatcagaagcttgaagaagcaatcccggtcaagtacccagagcagatctatgaagctatg
aggtactctgttcttgcaaagggtgctaagcgagcccctcccgttatgtgtgtcgccgct
tatgaactctttggtggtaaccgactcgctgcttttcctacagcttgtgctcttgaaatg
gttcacactgcttcactaattcatgatgatcttccctgcatggatgatgatccagtacgc
agaggtcaaccgtctaaccatacaatttatggtgtcgacatggcaatcctggctggtgat
gcactcttccctcttggcttccgccatattgtctctcaaacacctactgaacttgttcct
gaggcacgcatcttgcgtgtgattgctgagattgcccgcacagtgggatctgctggcatg
gctgctgggcagttcctagacctcaagggtgacgccaattctgttgattttattcaagag
aaaaaatatggtgaaatgagtgagtgctctgcagtgtgtgggggtttgttggctggtgct
gaagatgatgagatagaaaggttgagaaggtatgggagagctgttggtgtattgtatgaa
gtggttaatgatgttttggaggcaaaattggtggaaaaggaggaaactgagaagaaccaa
aagaaaggtaaaagttatgtgagtatgtacggggttaagaaggcgatggaggtggcagaa
gaccttcagaccaagtctaagggcgaattggatgggtttgacaagtatggtgagagtgta
gcagcactatatagcttcatagattatgctttttatagagacttcaatgttgatgacttg
agctaa
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