Theobroma cacao (cacao): 18607546
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Entry
18607546 CDS
T02994
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03082
ATP-dependent chromatin remodeling
tcc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
18607546
03083 Polycomb repressive complex
18607546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18607546
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
18607546
Histone modification proteins
HAT complexes
HATB complex
18607546
HDAC complexes
Sin3A-HDAC complex
18607546
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
18607546
PRC2.2
18607546
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
18607546
Heterochromatin formation proteins
Other heterochromatin formation proteins
18607546
Chromatin remodeling factors
NuRD complex
18607546
NuRF complex
18607546
NuRF complex (fruit fly)
18607546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_SCAP
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
DUF6922
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
18607546
NCBI-ProteinID:
XP_007041825
UniProt:
A0AB32VFX7
LinkDB
All DBs
Position
2:2968972..2971892
Genome browser
AA seq
408 aa
AA seq
DB search
MADDSEMNPDQVEEEFTVWKKNTPFLYDLVISHPLEWPSLTVHWVPSSPSPYGADPSFSV
HKLVLGTHTSGGASDFLMIADAVLPTLAAESDFGAKNDDPVFPKVEITQRMLVDGEVNRA
RCMPQNPVIIGAKTSGSEVFVFDYTKQAEKDKGGECDPDLRLRGHDKEGYGLSWSPLKEG
YLVSGSQDHKICLWDLSAWPQAKVLNAMHVYEAHESVVEDVSWHLKNENIFGSSGDDCQL
MIWDLRTNQTQHHVKAHDREINYLSFNPYNEWILATASSDSTVGLFDMRKLNVPLHVLSS
HTGEVFQVEWDPNHETVLASSGDDRRLMVWDLNRIGEEQLEIELDADDGPPELLFSHGGH
KAKISDFSWNKNEPWVISSVAEDNTLQVWQLAESIYRDDDTQTAEDYP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgattcggagatgaaccctgaccaggtagaggaagagttcaccgtatggaag
aagaacaccccgttcctatacgatctcgtcatttctcaccctctggagtggccttctttg
actgtccactgggtcccgtcttcgccgagcccatatggagcggacccgtctttttccgtc
cacaaactcgtcctcgggacgcacaccagcggtggcgcctcggactttctcatgattgcc
gacgcagtcctcccgaccctcgctgcagaatccgattttggcgccaaaaatgatgacccg
gttttccctaaggtggagataacacagaggatgcttgttgatggggaagtgaacagggca
aggtgtatgccacagaatccggttattattggtgcaaagaccagtggctctgaggttttc
gtgtttgattacaccaagcaggcagagaaggataagggaggtgaatgtgatcctgatttg
aggctgaggggtcatgacaaggaagggtatggattatcttggagtccacttaaggagggt
tatcttgtgagtggttcacaagaccataagatatgcctgtgggacttgtctgcttggcct
caagcgaaggttcttaatgcaatgcatgtttatgaggctcatgaaagtgtggttgaagat
gtgtcatggcatttgaagaatgagaatatatttggttcttcaggtgatgattgtcagttg
atgatctgggacttgcgcaccaaccaaactcaacatcacgttaaagcccatgatagagag
atcaattatttgtctttcaatccttataatgagtggattctggctacagcatcttctgac
tctactgttggtttgtttgatatgcggaagctgaatgtacctttgcatgttttaagcagt
cacactggagaggtcttccaggtagaatgggatcctaatcatgagacggtgctggcatct
tctggtgatgatagaagattgatggtttgggaccttaacagaattggggaagagcaatta
gaaattgagctagatgctgatgatggtcctcccgagctgcttttttctcatggagggcat
aaagccaagatatcagatttctcatggaacaaaaatgagccatgggtgatttcaagtgta
gctgaggataacactcttcaggtctggcaattggcagagagtatatatcgcgatgatgac
acccaaacagctgaggactatccatag
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