Theobroma cacao (cacao): 18607702
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Entry
18607702 CDS
T02994
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00100
Steroid biosynthesis
tcc00909
Sesquiterpenoid and triterpenoid biosynthesis
tcc01100
Metabolic pathways
tcc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
18607702
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
18607702
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tcc01006
]
18607702
Enzymes [BR:
tcc01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
18607702
Prenyltransferases [BR:
tcc01006
]
Terpene biosynthesis
Squalene/phytoene synthase
18607702
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
DUF2172
Motif
Other DBs
NCBI-GeneID:
18607702
NCBI-ProteinID:
XP_007042047
UniProt:
A0AB32VIC7
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Position
2:complement(3737942..3744964)
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AA seq
413 aa
AA seq
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MGSLGALVRNPDDFYPLFKLKMAARHAEKQIPSKPHWAFCFSMLLKVSRSFAFVIQQLDT
KLRNAVCIFYLVLRALDTVEDDTSIATDVKVPILIDFHRHIYNRDWHFSCGTKHYKVLMD
EFHHVSTAFLELEKGYQVAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHASGSEDLASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVSKL
EDLKYEENSVKAVQCLNDMVTNALIHVDDCLKYMSALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTNTMADVYGAFYDFSCMLKAKVDNNDPNAQKTLSRL
DLILKTCRDSGVLNKRKSYIIQNQSNYTPLLAVMLFIILAIIMANLSPKWPNN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggagtttgggagcgcttgtgagaaacccagatgatttttatccattgttcaagctg
aaaatggccgcgaggcatgcggagaaacagatcccatcaaagcctcactgggctttctgt
ttctctatgcttctcaaagtttctcgtagtttcgctttcgttattcaacagcttgacacc
aagcttagaaacgccgtgtgcatattttatttggttcttcgagcccttgataccgttgag
gatgacactagcatagcaacagatgtcaaagttcccatactgatagattttcatcgtcac
atatataatcgtgactggcacttttcatgtggtacaaagcactacaaagttctcatggac
gagtttcatcatgtatctactgcttttctggagcttgaaaaaggttatcaggtggcaatt
gaggacattacaaaaagaatgggtgcagggatggcaaaatttatttgcaaggaggtagaa
acagttgatgactatgatgaatattgtcactatgtagcaggacttgttggattaggtctg
tccaaacttttccatgcctctgggtcagaagatttggcttcagattcgctctccaattca
atgggtttatttcttcagaaaacaaatattatccgagattatctagaagacattaatgag
ataccaaagtcacgcatgttttggcctcgccagatttggagtaaatatgtcagcaaactt
gaggatttgaaatatgaggaaaactcagtcaaggcagtgcagtgcctgaatgacatggtc
actaatgctttaatacatgtggatgattgcttgaagtacatgtctgctttacgtgatcct
gcaatatttcgattttgtgctatccctcagatcatggctattggaacactagccttgtgc
tacaacaacattgaagtcttcagaggtgttgtgaaaatgagacgtggtctcactgcgaaa
gtcattgaccgaacaaacacaatggctgatgtctatggtgctttctatgatttttcttgc
atgttgaaagccaaggttgacaacaatgatcctaatgcacaaaaaacattgagcagactt
gatttaatcctgaaaacttgcagagactcaggggtcctgaacaaaaggaaatcttacata
attcagaatcagtccaattatactcctcttctggctgtcatgcttttcattatattggcc
atcattatggctaatcttagtcccaagtggccaaataactag
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