Theobroma cacao (cacao): 18607713
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Entry
18607713 CDS
T02994
Name
(RefSeq) coatomer subunit alpha-1
KO
K05236
coatomer subunit alpha
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tcc04131
]
18607713
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tcc04147
]
18607713
Membrane trafficking [BR:
tcc04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
18607713
Exosome [BR:
tcc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
18607713
Exosomal proteins of bladder cancer cells
18607713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
TPR_COPA_B
EIF3I
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR41
WD40_RFWD3
NBCH_WD40
Beta-prop_SPT8
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_At4g14310
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
18607713
NCBI-ProteinID:
XP_017971428
UniProt:
A0AB32W001
LinkDB
All DBs
Position
2:3828271..3834112
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AA seq
1219 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHAKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
MSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEHPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRKKTVSPADDILR
LSQMNTDLFGGVDSVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGLQTFRREHDRFWILAAHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDSLFYAKDRFLRYYEFSTQREAQVIPIRRPG
STTLNQSPRTLSYSPTENAVLICSDVDGGSYELYVIPKDSIGRGDSLQEAKRGLGSSAIF
VARNRFAVLDKGNNQVLIKNLKNEVVKKSGLPVPTDAIFYAGTGNLLCRSEDRVVIFDLQ
QRIVLGDLQTPFVKYIVWSNDMESVALLSKHAIIITNKKLVHQCTLHETIRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTLFCLDRDGKNRTIVIDATEYI
FKLSLLRKRYDHVMGMIRNSKLCGEAMIAYLQQKGFPEVALHFVKDEKTRFNLALESGNI
QIAVASAKEIDDKDHWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNLEKLSK
MLKIAEVKNDVMGQFHNALYLGDIQERVKILENSGHLPLAYLTASVHGLQDVAERLAAEL
GDDVPPLPEGKEPSLLMPSAPVLCGGDWPLLRVMKGIFEGGLDSDIGRGAVDEEEEGVEG
DWGEDLDVVDVDGLQNGDITAILEDGEVAEENEEEGGWDLEDLELPPEADTPKVSGNARS
SVFVAPTPGMPVNQIWIQRSSLAAEHAAAGNFDTAMRLLSRQLGIRNFAPLKSMFLDLNT
GSHSYLRAFASAPVVSLAVERGWNESASPNVRGPPALVFNSSQLDEKVNAGYKATTAGKF
TEALRLFLNILHTIPLIVVESRREVDEVKELIIIAKEYVLGLQMELRRKEMKDNPVRQQE
LAAYFTHCNLRTPHLRLALQNAMSVCFKAKNMATAANFGRRLLETNPTNENQAKTARQVL
QAAERNMTDASQLNYDFRNPFVVCGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCTICD
LAVVGADASGLLCSPSQIR
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgttgacaaagtttgagacgaagagtaatagagtaaagggactgagtttccacgctaag
aggccatggatcttagccagtctccacagtggcgttatccagttatgggactatcgtatg
ggtactctgattgatcgattcgacgaacacgatggccccgttcgcggcgtccatttccac
atgtctcagcctttgttcgtctctggaggggatgactacaagataaaggtctggaactac
aagttgcatagatgtcttttcacacttcttgggcatcttgattatattcgtactgtgcaa
tttcatcatgagcatccgtggattgtgagtgccagtgatgatcagactattcgcatctgg
aactggcagtcacgaacttgcatatctgtgttgactggccataatcattatgttatgtgt
gcctcattccatcctaaagaagacctcgttgtatcggcctcccttgatcagactgttcgg
gtttgggatattggttccctgagaaagaagactgtctccccagcggatgacattttgcgg
ttaagtcagatgaacacagatctttttggtggtgttgactcagttgttaagtatgtgttg
gaaggtcatgaccgaggagtaaattgggctgcatttcaccccaccttaccgctgattgtc
tctggagcagatgatcgacaagtgaaattgtggcgtatgaacgagacaaaggcttgggaa
gtggataccttgagagggcacatgaataacgtgtcatgtgttatgtttcatgccaaacaa
gacatcattgtgtctaattccgaggataaaagtattcgtgtgtgggatgtaacaaagcga
actggacttcaaactttccgtcgagaacatgacagattctggattcttgctgcccatcct
gaaatgaatcttttggctgctggacatgacagtggcatgattgtatttaagctagagaga
gagcgtcctgcttttgcagtgagtggggattctctcttttatgccaaagaccggttttta
agatattatgagttttcaactcaaagagaggcgcaagtaattccaattcgacggcctggt
tccacaacgttgaatcaaagtccaaggactctttcttacagtcctacagaaaatgctgtt
cttatctgctcagatgttgatggaggatcttatgagttgtatgtgataccaaaagacagc
attggtaggggtgacagtttgcaggaggcaaagagaggtcttgggagttctgctatattt
gtggctcgaaaccggtttgctgtgctcgacaaaggcaacaaccaagtcttaatcaagaat
ctaaaaaatgaagtagttaaaaagagtggcctcccagtgcctacggatgcaatattttat
gctggaacaggtaacttgttgtgtaggtcagaggatagagtagttatatttgatctccag
cagaggattgttcttggtgatcttcaaaccccctttgtgaagtatattgtttggtctaat
gatatggaaagtgttgctttgctcagcaagcatgccattatcattactaacaagaagctt
gtgcaccagtgcactcttcatgagacaatacgtgtaaaaagtggaggctgggatgacaat
ggtgttttcatttacaccaccctaaaccatataaaatactgtcttcccaatggagatagt
ggaataattcgaacgcttgatgttccaatatacataacaaaggtttcaggaaatacttta
ttttgcctggatcgtgatgggaagaataggactatagtcattgatgctacagaatacatt
ttcaagctctctctgcttcggaagagatatgatcatgttatgggcatgataagaaactcc
aagctttgcggtgaggctatgattgcttatctccaacagaaggggttccctgaagtggct
ctccattttgtcaaagacgagaaaacacgctttaatttggctctagagagtgggaacatt
caaattgctgttgcatcagctaaggagatagatgacaaagatcattggtataggttgggt
gtggaggctcttcgccaaggcaatgcaggtatagtggaatatgcttatcagaagacaaaa
aactttgagaggttgtcttttctttatctcataaccggtaacctggaaaagctgtccaag
atgctgaaaattgcagaagttaagaatgatgttatgggtcagtttcacaatgctttgtat
cttggtgatatccaggaacgtgttaaaatcctggagaattctggtcacttgcctcttgct
taccttacagcatcggtccatgggctacaggatgtggctgaaaggttagcagctgagttg
ggagatgatgttcctcctctgccagaggggaaagaaccttcccttttgatgccttctgcc
cccgttttatgtggtggtgattggccccttctgagagtcatgaaaggcatatttgaaggt
ggattggatagtgatattggcaggggtgctgtggatgaagaggaggagggtgtagaaggt
gattggggtgaagatcttgatgtggttgatgttgatggcttacagaatggtgacatcact
gcaattttggaggatggggaagtggctgaagaaaatgaagaagagggtggatgggacctt
gaagatttggaacttccccctgaggcagacaccccaaaggtttctgggaatgctcggtca
tctgtttttgtggcacctactccaggtatgcctgtaaatcagatttggattcagagatca
tctcttgctgctgagcatgcagcagctggcaattttgatacagcaatgcgattgcttagc
aggcaacttggcattagaaactttgcccctttgaagtcgatgtttcttgatcttaacact
ggtagccatagctatctccgtgcatttgcatctgcaccagtggtgtcactggcagttgag
cgtggatggaacgaatctgctagtcctaatgtgaggggtccaccagcacttgtgttcaat
tcctctcaattggatgaaaaggtgaatgcgggttacaaggccacaacagctgggaaattc
actgaagctcttcggcttttcctcaacattcttcatacaattccattgattgttgtggag
tcaaggagggaagttgacgaagtcaaggaattgattattattgctaaggagtatgttctt
ggtctacagatggagcttaggaggaaagaaatgaaagacaatccagtacgccagcaggag
cttgctgcctacttcacccactgcaaccttcggacacctcacttaaggcttgctttgcaa
aatgcaatgtctgtatgcttcaaggcaaagaacatggccacagcagctaactttggcaga
cgtctactagaaacaaaccccacaaatgagaatcaagcaaagactgcaaggcaagtgctt
caagctgctgagaggaatatgacagatgcctctcagctgaactatgatttcagaaaccca
tttgtggtatgtggggcaactcatgtgccaatttacagaggacagaaagatgtatcttgc
ccatattgcactacacgcttcgttcctagccaggaagggcaattgtgtactatctgtgat
cttgcagtggttggggcagatgcttcagggttgctctgttctccttcacagatacgatga
DBGET
integrated database retrieval system
