Theobroma cacao (cacao): 18607728
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Entry
18607728 CDS
T02994
Name
(RefSeq) protein CHROMATIN REMODELING 35
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18607728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18607728
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
18607728
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_16
Motif
Other DBs
NCBI-GeneID:
18607728
NCBI-ProteinID:
XP_007042093
UniProt:
A0AB32VGV0
A0A061DYY2
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Position
2:complement(3918691..3924792)
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AA seq
899 aa
AA seq
DB search
MESPLPVLRTNYGGSKEFYSKGCKRTKISRDSKDDDSVATPGKPRHETVSPNVVDYSDPC
AVSSMLETFNTGGKYGSVTKDLEALISRNMQLVSKVLALHPCLSNVLADVEKSPRKEASQ
LPSRQLAHLSRTNFIDLEDESAESGITSMASPVVILDSDDEDSRSRRPLHPVQEIVLRKP
SGILLSKEIPVGEPNVSQVRESMGNRIYKEEKVSLTCEIGIKKDKGVYVGVEEDVDTQTE
AADDGLGDIWQEMSMALEFSKDGFEDPSSSERMSEDEEDCDHSFVLKDDLGYVCRICGVI
ERGIETIIDIQYNKVKRSTHTYALEPRNAKNRESTETVGVNFSEDDLTVTDISAHPRHLK
QMKPHQLEGFNFLLSNLVTDNPGGCILAHAPGSGKTFMIISFMQSFLAKYPHAKPLVVLP
KGILATWKKEFETWQVEDMPLLDFYTVKADTRLQQLDVLKKWVECKSILFLGYKQFSTII
CDGGFSQTSISCQEILLRAPSILILDEGHTPRNENTDVLQSLAKVQTARKVVLSGTLYQN
HVKEVFNILNLVRPKFLRLDTSKSVIKKIMSKVHISGVRKQLKAGADAAFYDLVEHTLQK
DENFERKVSVIHDLREMTSKVLHYYKGDFLDELPGLVDFTVVLGLSPRQKDEVQKLKRFQ
RKFKISSVGSAVYLHPKLNSFSENSVMTDDKMDDLLDKLDVKEGVKAKFFLNMINLCESA
GEKLLVFSQYLIPLKFLERLCVKMKGWHPGIEIFSISGESSSDHRELSMERFNNSPDAKV
FFGSIKACGEGISLVGASRVIILDVHLNPSVTRQAVGRAFRPGQKKKVYAYRLIAGESPE
EEDHSTCFKKELIAKMWFEWNKYCGNRDFEMETVDVNECNDLFLESPLLREDIKILYKR
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcccctgccggttttgcgaacaaattacggaggctcaaaagagttctattct
aaaggttgtaaaaggacgaaaatatcgcgtgattcaaaagatgatgacagcgtggccact
cctggaaaaccacggcatgaaactgtctctccaaatgttgtcgattactctgacccatgt
gcagtctccagtatgcttgaaacctttaataccggtggtaaatacggaagtgttacaaaa
gatttagaggcccttatctctaggaatatgcaattggtaagtaaggtgcttgctttgcat
ccttgtctttccaatgtgttagcggatgtggaaaagagcccaaggaaagaggcgtcacag
ttgccaagtcgacaacttgcccatttgtcacggacaaattttattgacttggaagacgag
tctgctgaaagtggcatcacatcaatggcgtcacctgtagtaattctggattcggatgat
gaagacagcagaagtcggaggcctctacatcctgttcaggaaattgtactgaggaagcca
tctgggatattactctctaaggagataccggttggggagcctaatgtatctcaggttagg
gagtccatgggaaacagaatttacaaagaagaaaaagttagtctaacctgcgaaattggt
atcaagaaggataaaggtgtttatgttggtgttgaagaggatgttgatactcaaactgag
gctgcagatgatggtttgggagatatttggcaggagatgtcaatggcattagagttttcc
aaggatggttttgaggatccatcatcaagtgaacgcatgtcagaagatgaggaggattgt
gatcattcttttgtcttgaaggatgatcttggttatgtttgtcgcatttgcggggtaatc
gagagaggaattgagactataattgacatccagtataacaaggtcaaaaggagtacacat
acttatgcattagagccacggaatgccaaaaatagagagtcaactgaaaccgttggagtg
aatttttctgaagatgatttaacagtaacggacatatctgctcatccgaggcatttgaag
cagatgaaacctcaccaactagaaggttttaattttcttctgagcaatttggtgacagat
aaccctgggggttgcatcttggcccatgcgcctggatccggaaagacattcatgataatt
agcttcatgcagagttttctagccaaatatccacatgctaagccactagttgtgcttcca
aaaggtatcttggctacatggaaaaaggagtttgaaacatggcaagtagaggatatgcca
ctgcttgatttctacactgtgaaagcagataccaggttgcagcaattggatgtcttaaaa
aagtgggttgagtgcaagagtatcctttttctcggatacaaacaattctctacaattatt
tgtgatggtggatttagccagacctcaatttcctgccaagagatactcttacgagcaccg
tcaattctaattttggatgaagggcatacaccaaggaatgagaacactgatgtgttgcaa
tctcttgcaaaagtgcaaaccgctcgaaaagttgtactttctggaaccctctatcagaat
catgtgaaagaggtatttaacatattaaacctagttcgaccaaagtttcttcggttggac
acttccaaatcagtaattaagaagataatgagcaaggttcatatatcaggagtcaggaag
cagttgaaagctggagcagatgcagctttttatgatttggtggagcacacactgcagaag
gatgaaaattttgagaggaaagtctcagtaatacatgatctacgtgagatgaccagcaaa
gtccttcattactacaaaggagatttcttggatgagcttcctggtcttgttgatttcact
gtagtactcggtcttagtcccagacagaaggatgaagttcagaagttaaaaaggtttcaa
aggaagttcaaaatttcatctgttggtagtgctgtttatctacatccaaaactgaattct
ttctctgagaattccgtcatgacagatgataagatggatgacttgttggacaaattagat
gtcaaagagggagtcaaagcaaaattttttcttaatatgataaatttgtgtgagtcagct
ggtgagaagctccttgtttttagtcagtatctcatacccttgaaatttttggagagattg
tgtgtgaaaatgaagggctggcatccaggaattgagattttttctatctcgggtgaatca
agctctgaccatcgagagttgtctatggagcgcttcaacaactctcctgatgctaaagtt
ttctttggatctattaaggcttgtggagaaggaatttctttggtgggggcatcccgagtt
ataatcttggatgttcatcttaatccatctgtgacccgccaagctgttggccgtgcattt
cgtcctggtcagaagaagaaagtgtatgcatatagactgattgctggtgaatctcctgaa
gaggaggatcatagtacttgtttcaagaaggaattaattgcaaagatgtggtttgagtgg
aacaagtattgtggcaaccgagattttgaaatggagactgttgatgtgaatgagtgcaat
gatctgtttctggaaagtcctttgttgagggaagatattaagattctgtacaaaaggtag
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