Theobroma cacao (cacao): 18607758
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Entry
18607758 CDS
T02994
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18607758
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
18607758
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
18607758
NCBI-ProteinID:
XP_007042154
UniProt:
A0AB32VHI2
LinkDB
All DBs
Position
2:4099591..4104620
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AA seq
849 aa
AA seq
DB search
MGKVKGKHRLDKYYQLAKEHGYRSRASWKLVQLDSKFSFLNSAHAVLDLCAAPGGWMQVA
VQRVPVGSLVLGLDLVPIAPIRGAIALQQDITKSECKSKIKRVMEEHGAPAFDVVLHDGS
PNVGGAWAQEAMSQNALVIDSVKLATQFLAPKGTFVTKVFRSQDYSSVLYCLKQLFEKVE
VDKPAASRSASAEIYLLGLRYKAPAKIDPRLLDVKHLFQGSVEPQKKVIDVLRVTKQKRH
RDGYEDGETISKKVSTAADFIRSDSPLEILGSVTSITFGDPASLPIKDHSSTTEEIKALC
DDLRVLGKQDFKCLLKWRLQLRKALSPSEKATSSTPATDVDKGEEENEDDKLLNEMEELT
YAMERKKKRAKKLVAKRQAKDKSRKATGMQIDALEDGYIDHELFSLSSIKGKKDLAAVDS
TEYDDGNNDLRGSKDEENQDKTEEESSSDIDSDEERRRYDEQIEEILDHAYEQYVAKKDG
STKQRKRAKEAYSDQLEGGDGDDIILSDHDSDKDEADPEANPLLVPLDDGEGPTQEEITN
RWFGQDIFAEAVEQGDLGKYDSDDAMEVDNQVDRLPVPERAKEKKRQDERQIADKVKEKK
TNNASGLNRSQLQAPRAEDDFEIVPAPATDSSDDSSSDDSEEEDVDTKAEILACAKKMLR
KKQREQILDDAYNKYMFDYEGLPKWFLEEERRHHQPIKPVTKEEIAAMRAQFKEINARPA
KKVAEAKARKKRVAMKKLEKVRQKANSISDQTDISDRSKRKQIEQLYKKAMPKKTQKEYV
VAKKGVQVKAGKGKVLVDRRMKKDSRARGMGKSGKGGSKKGKNGKVRKGKGSVKASGNKE
NKGKKGVRA
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagtgaaaggaaagcataggttagataagtactaccaacttgccaaggaacac
ggctaccgttccagagcatcatggaagctagtccaactcgactccaagttctccttttta
aattctgcccacgccgtcctcgacctctgcgccgcccctggtggttggatgcaggttgct
gtccagagagttcctgttggcagcctcgtactcggtctcgaccttgttcccatcgcccca
atacgaggtgccatcgccctccaacaagacataaccaaatccgaatgtaagtccaaaatt
aaacgggtcatggaagagcatggggccccggcttttgatgtggttttgcatgatggatcc
cctaatgttggtggagcctgggctcaggaggcaatgagccaaaatgctttggttattgat
tctgttaagctggctacccagttcttggctcccaagggcacttttgttactaaggttttt
aggtcccaagactatagttctgttctctattgtctcaagcagttatttgaaaaggttgag
gtcgataaacccgcagctagtcgttcagcatcagctgagatttatcttttgggcctgagg
tataaagcccctgcaaagattgatccacgtcttcttgacgtcaagcatctatttcaggga
tcagtagaaccacagaagaaggtgattgatgtacttagggtaacaaaacaaaagagacac
cgtgatggttatgaagatggagagacaatctcaaagaaggtgtctacagctgctgacttc
attaggtctgactctcctcttgaaatcctaggttcagttacttccataacctttggcgat
ccagcttcattgcctattaaggatcacagttctaccacagaagagatcaaagctctttgt
gatgatttgcgtgttttgggaaagcaagatttcaagtgccttttgaagtggcggttgcaa
ttgagaaaagctttgtctccttcagaaaaggctacttcttccacccctgccacagatgtt
gacaaaggggaagaagagaacgaagatgataaattactcaatgaaatggaggagctcaca
tatgctatggaacgtaagaagaaaagagcaaagaagcttgtagcaaaaagacaagctaag
gataaatcacggaaggcaacaggaatgcaaatagatgccttggaagatggttatattgat
catgagttgttttctttgtcttcaatcaagggtaagaaagatctagcagcagttgactcc
actgagtatgatgatgggaataatgacttaaggggtagcaaagatgaagaaaaccaggac
aaaactgaagaggagtcatccagtgatattgattctgatgaagaacgcagaagatatgat
gaacaaatcgaagagattcttgatcacgcttatgaacagtatgtggccaaaaaggatgga
agcacaaagcagaggaagcgtgcaaaagaagcctactctgaccagttggagggtggtgat
ggtgatgatatcattctttctgatcatgattcagacaaggacgaggctgatcctgaagca
aatcctctcttggtaccactggatgatggggaaggaccaactcaggaggagattacaaac
aggtggtttggtcaggatatttttgctgaagctgtagagcagggagatttagggaagtat
gacagtgatgatgcaatggaggttgataaccaagtggacaggctacctgttcctgagagg
gccaaagaaaagaaaaggcaggatgaaagacaaatcgctgacaaggtcaaggaaaagaaa
acaaacaatgcttcgggcctcaatcgtagtcaactccaggctcctagggcggaggatgat
tttgagattgtccctgctccagctacagattctagtgatgattcgtcttcagatgactca
gaggaagaagatgttgatacaaaagctgagatattggcttgtgcgaagaagatgctcagg
aaaaagcaaagggagcaaattcttgatgatgcctataataaatatatgtttgattatgag
ggtttacccaagtggttcttagaggaggagaggagacaccaccaaccaattaagcctgtt
acgaaagaagagattgctgcaatgcgagcacaattcaaagagatcaatgctcgacctgct
aagaaagttgcagaggcaaaggctagaaagaagcgggtagcaatgaaaaagcttgagaag
gttcgacagaaagcaaatagtatatcagaccaaactgacatctctgatcggtcaaagagg
aagcaaattgaacaactatacaagaaggctatgcccaaaaagacccaaaaggaatatgtg
gttgcgaagaagggcgtacaagtcaaggctggcaaagggaaagtccttgtcgatcggcgg
atgaaaaaggattcgagggcacgcggaatgggtaaatcaggaaaaggtggttcaaagaag
ggaaagaacggaaaagttaggaaaggcaaaggatccgttaaggcttcagggaacaaggaa
aacaaagggaaaaaaggtgtgcgcgcatga
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