KEGG   Theobroma cacao (cacao): 18607788
Entry
18607788          CDS       T02994                                 
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
  KO
K12581  CCR4-NOT transcription complex subunit 7/8
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    18607788
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tcc03019]
    18607788
Messenger RNA biogenesis [BR:tcc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     18607788
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     18607788
SSDB
Motif
Pfam: CAF1
Other DBs
NCBI-GeneID: 18607788
NCBI-ProteinID: XP_017970686
UniProt: A0AB32VW04
LinkDB
Position
2:4273117..4274137
AA seq 134 aa
MTAPGKKPVLVRQVFAEDLEREFALIRSAIDKYPFVSMDTEFPGTIFKQDKNLIHQADPA
INYLFMKSNVDALRIIQLGLTLADSQGVSHQAGSDSLLTLQCLMELKQSKVFDRINNDRM
LPALALYGLVTVLG
NT seq 405 nt   +upstreamnt  +downstreamnt
atgacggcgcctggcaaaaagccagtattggttcgacaagtctttgctgaagacttggaa
cgtgagtttgcgctaatccgtagtgcaattgataagtacccttttgtctccatggacaca
gagtttcctggtacgattttcaaacaagataaaaacctcattcatcaagctgatcctgct
atcaattatctgttcatgaaatccaatgttgatgccttacgtattattcaacttggttta
actctcgctgattctcaaggggtgagccatcaggcagggtcggacagtctgctaaccctt
caatgcttgatggaactgaagcagtcgaaggtttttgatcgcatcaacaatgaccgaatg
ctgcctgctctcgcattgtatggactggttacagtgttaggatga

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