Theobroma cacao (cacao): 18607922
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Entry
18607922 CDS
T02994
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18607922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18607922
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
18607922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SLFN-g3_helicase
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
18607922
NCBI-ProteinID:
XP_007042404
UniProt:
A0AB32VH92
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Position
2:complement(4958064..4965484)
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AA seq
968 aa
AA seq
DB search
MARETQSTSSMEEEEEEEIFSDSDPSYSSDEYTVDRQEEEEEANDHDDDGDGGQSTAHHP
PSDQDLKSKNVDALLRGNLIVRRQPLLPRVLSVTEGAAVCRKPFKLPCSNGYGNGNEQLA
RRLWARKRFVPWGSSRPALVAITNRLDVNRTDGTDVVEEIVTLPPGVDPLVLWQPEESED
GPNNLVPIAVDPLLVRFLRPHQREGVQFMFECVSGLYSAANIYGCILADDMGLGKTLQSI
ALLYTLLRQGFDGKPMVKKAIIVTPTSLVSNWEAEINKWVGERVQLIALCESSRDDVVCG
IDSFTSPCSSLQVLIVSYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTITNRALAALS
CKRRILLSGTPMQNDLEEFFAMVNFTNQGILGDVAYFRRYYEAPIICGREPTASEEEKML
ASERSSELSAKVNQFILRRTNVLLSNHLPPKIVEVVCCKLTPLQSELYNHFIHSKNVKRA
ITEEAKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTTGFEDCMRFFPPEMFSGRSGSW
TGGDGAWVELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD
GTTSISKRQKLVNRFNDPTKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA
ARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQVDSLMAQGNFFSTED
LRDLFTFYDNVRSEIHEKMNCNRCENYDTGPENIGEQEQYDSKNGSSASDQEVFDIGGFA
GLAGCLDKLKSSEKQVGTPLEEDLVSWGHHFRSESVPDAILQASAGDEVTFVFTNQVDGK
LVPIESKVNPRMQEKEGNKSQNIGKANVLKREGTKIQKTANQNLDSKSSFLSKHHNLLNS
VSSTRNQNSLRVTPVTSSTPFQGQIVKSMRSSLRGELHETIKGELSLGNQLPLKRSSPAS
VEHDDDFQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagaaacacaatccacgtcatcaatggaggaagaagaggaggaagaaattttc
tccgattccgacccgagctattcaagcgacgaatacaccgttgatcgtcaagaagaagaa
gaagaagcgaacgatcatgacgacgacggtgacggtggacaatccaccgctcaccatcca
ccgtccgatcaagatctcaaatctaaaaacgtcgatgctttgctaaggggcaaccttatt
gtgaggagacaaccgctgcttccgcgagttctttcagtgacagaaggagcagcagtttgt
aggaaaccattcaagctcccatgttctaacggctacggtaatgggaatgaacagcttgca
cgtcgtctttgggcccggaagcggtttgttccttggggctcttcaaggccagcgttagta
gcaataaccaatcggctggatgtaaatagaacagatgggactgatgttgtggaagaaatt
gtgactctgccacctggtgttgatcctctggtattgtggcaacctgaagaatctgaagat
ggacccaacaacttagtgccaatagcagttgatcccttgcttgttcgttttcttcgaccc
catcaaagagaaggggttcagttcatgtttgaatgtgtttccgggttatatagtgctgct
aatatatatggatgcattcttgctgatgatatgggtttgggaaagacattgcagtcaatc
gctttactatatactcttctacgtcaaggttttgatgggaagcctatggttaagaaggcc
attattgtcaccccaaccagtcttgtcagtaactgggaggcagaaatcaataagtgggtt
ggagaaagagttcagcttatagctctctgtgaaagcagcagagatgatgttgtctgtgga
attgacagcttcacaagtccctgcagctctttacaggtattgattgtttcatatgagaca
tttaggatgcattcatcaaaattttgccaaagtgagtcttgtgatcttctcatttgtgat
gaggctcacaggctgaaaaatgaccagacaataacaaaccgggcattggctgctctctca
tgtaagcgccggattctgttatctggaactcccatgcagaatgaccttgaagagttcttt
gcaatggtcaacttcactaatcaagggattttgggtgatgttgcatactttcgtcgctac
tatgaggcaccgattatttgtggaagagaaccaactgctagcgaagaagagaagatgcta
gcttcagaacgctcttcagaattaagtgcaaaagtgaatcagttcatattgaggaggact
aatgtgttgctatcaaatcatctgcctccaaaaatagttgaagtagtttgctgcaagttg
actcctctacagtccgagttatacaaccattttatacactccaaaaatgttaaacgagcc
atcactgaagaagcaaagcaatcaaagatattggcttatattacagctcttaagaagcta
tgcaatcatccaaagctcatttatgatactataagaagtggaagtccaggaactacagga
tttgaggactgtatgcgctttttcccaccagaaatgttctcaggaagatctggatcatgg
actggtggtgatggggcttgggttgaactgtctgggaaaatgcatgtattagcccgattg
ctggctcatctacgtcagagaactgatgaccgcattgttcttgtctcaaactatacacag
acgctggacctatttgctcaattgtgtcgtgaaagaagatatccatacttgaggcttgat
ggaaccacatcaattagcaaaaggcagaaactagttaatcgttttaatgacccaaccaag
gatgagtttgtgtttctattaagtagcaaggctggtggttgtggtctcaatttgataggt
ggtaaccggcttgtcttgtttgaccctgattggaaccctgctaatgataagcaagctgct
gcaagggtttggagagatgggcaaaaaaagagagtttacatctacagattcctaagtact
ggaacaattgaagaaaaggtgtaccagcgtcaaatgtcaaaggaagggcttcaaaaagtt
atccagcaggagcaagtggacagccttatggcacagggaaactttttctcaacagaagat
ttacgtgaccttttcacattttatgataatgtgaggtctgaaattcatgaaaagatgaat
tgcaaccgttgtgaaaattatgatactggccctgagaacataggagagcaggaacaatac
gactcaaaaaatggaagttctgcatctgatcaagaggtttttgacataggtggatttgca
ggattagctgggtgtttggataagttaaagagctcagaaaaacaggtggggactccctta
gaagaggatttagttagttgggggcatcattttcgctcagaatcagttcctgatgctatt
cttcaagcttcagctggtgatgaggtcacattcgtcttcacaaatcaagtagatgggaag
cttgttcctattgaatcgaaggtaaacccaaggatgcaggaaaaggaaggaaataagagc
caaaatattggaaaggcaaacgtgctcaaaagagaaggaactaagatccagaagaccgcc
aatcaaaacctggattctaagtcaagctttttgtccaaacatcacaacctattaaattct
gtttcttccactagaaatcaaaattctttgagggtaacaccagttacttcctccacccct
ttccaagggcaaattgtgaaatcaatgagaagttccctgagaggtgaacttcatgagaca
ataaagggtgaactttctcttggaaatcaattacccctgaaaagatcatcccctgcttct
gtagaacatgatgatgattttcaatga
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