Theobroma cacao (cacao): 18608196
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Entry
18608196 CDS
T02994
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18608196
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
18608196
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
18608196
NCBI-ProteinID:
XP_007042822
UniProt:
A0AB32VEI4
A0A061E8U9
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Position
2:complement(6530886..6540583)
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AA seq
748 aa
AA seq
DB search
MGSTFLSIPTKRAMPDATPSSNGPSKRSKPPATPLPVPPGHVAFRLLCHVSRVGGVIGKS
GSVIKQLQQATGSKIRIEDAPAESPDRVITVIGPNAVNTKIVLNYGSLGNGYGSSVEEID
VSKAQEALVRVFERILEVAAESDGVALVMVSCRLLAEVKHVGSVIGKGGKVVEKIREDTG
TKIRVLTDKLPACASPTEEIVEIEGGVLAVKKALVAVSHRLQDCPPVNKTRITENRIIES
VPSEAWHKPIELLPQETLRRPIDLFPQDTLYRPIDLLPQETLRRAIEVLPQETLHRPIEV
VPQEPLHRPIDVVPQGSLRRHIDVVPQGSLRRPIDVVSQEALPDLNIDHLSQRSSLMPTI
SSSSISYATRVHPLSLESENASPLDTKTLQHEVVFKILCSSDRVGGVIGKGGAIIKALQS
DTGTTITIGPTLTDCDERLVTVTASENPESQYSPAQKAVVLVFVRALEASIEKGLDSGSG
KGSNVTARLVVPSGQVGCLLGKGGAIISEMRKVTGTGIRILGSDQVPKCVTENDQVVQIS
GGYLNVKDAIYHVTGRLRDNLFSSTLKNAGAKSSSAVLTETSPYERLMDTAPLGLQVSSG
VSYNLSRHTTLAPNSTDSFGLSRSLDCPHSPGLWTSETGNVLNPRSTTDIGRGLTSLRGG
FELGSGNRSAIVTNTTVEIRVPENVIDSVYGENGRNLSRLREISGAKVIVHEPQIGTSDR
IVVISGTPDQTQAAQSLLQAFILTGPSR
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcaccttcctctctataccaacaaagcgagccatgcccgacgcgaccccttct
tcgaacggcccctccaagcgttccaagcctccggctactcctctccctgtcccccctggt
cacgttgccttccgtctcctctgccacgtgtcccgtgtcggtggcgtcatcggcaagtca
ggcagtgtcatcaagcaactgcaacaggctaccggttccaagatccgaattgaggatgcc
ccggctgaaagcccggaccgggttattaccgtcataggcccgaatgctgttaataccaag
attgtactgaattatggtagccttggcaatggttacggtagtagcgttgaggaaatcgat
gtgtccaaggcgcaggaggcgttagtgagagtgttcgagaggattctggaggtggcggcg
gagagcgatggagtggccttggtgatggtttcttgtcggttattggcggaggttaagcac
gttgggagcgtgatagggaaaggaggtaaggtagtggagaagataagggaagatactggg
accaaaattagggttttgacggataagctaccggcttgtgccagccccacggaggagatt
gtggagattgaaggaggtgttttagctgtaaagaaagcgcttgttgctgtctcacatcgc
ctccaagattgccctcctgtcaataaaacaaggataactgaaaacaggatcattgaatca
gttccttcagaggcttggcataaacctattgagttacttcctcaggagactttgcgaagg
cctattgacttatttccccaggacactttgtacaggcctattgacttacttcctcaggag
actttgcgcagagctattgaggtacttccccaggagactttgcacagacctattgaggtt
gttccacaggagccattgcacagacctattgatgttgttccacagggctccttgcgtaga
catattgatgttgttccacagggctccttgcgtagacctattgatgttgtttctcaggag
gctttacctgatctgaatatagatcatctttcacagcgtagttccctgatgcctactata
tccagtagctccatcagttatgccaccagagttcatcctttgtctctagagtccgagaat
gcttctccattggatacaaaaacattgcagcatgaagtggtttttaaaattctttgctcc
agtgatagggttgggggtgttattggaaagggaggtgcaatcattaaggctcttcaaagt
gatacaggaactactattaccattggacctacactcactgattgtgatgaacggttggta
actgttactgcatcagagaacccagaatcacagtattctccagcacaaaaggctgttgtg
cttgtttttgtaagagctttggaggcgtcaattgaaaaagggctagattcaggctcaggt
aagggttcaaatgtcacagctcggcttgtagttccatcaggccaagttggctgtctgttg
ggaaaaggaggtgcaataatttctgaaatgcgtaaagtgactggtaccggcattcgaatt
ttgggatctgaccaggtccctaagtgtgtcactgaaaatgaccaagtggtgcagatttca
ggagggtatttgaatgtgaaagatgctatatatcatgttactggtagactacgagataac
ctattttctagcacactgaagaatgctggagcaaaaagtagttctgctgttttaactgag
accagtccttatgaaagattgatggacactgcccctcttgggctgcaagtatcaagtggt
gtttcttataatcttagtcggcatacgacattggcaccgaatagtacggattcctttgga
ctttcccgtagtttagattgccctcattcaccagggttatggacatcagagacaggtaat
gtactgaatccaaggagcaccacagatatcggcagaggattgacttctcttagaggtgga
tttgaacttggcagtggaaacagatctgctattgtgacaaatacaactgtagagattaga
gttcctgagaatgttattgactctgtttatggggagaatggtcgcaatctgtctcggttg
agagagatctctggtgccaaggtcatagtgcatgaacctcaaataggaacaagtgacagg
attgttgtcatatctgggacacctgatcaaacccaggcggctcagagcctccttcaagct
ttcatcctcactggtccatcacgttga
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