Theobroma cacao (cacao): 18608741
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Entry
18608741 CDS
T02994
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
18608741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18608741
03036 Chromosome and associated proteins [BR:
tcc03036
]
18608741
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18608741
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18608741
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
18608741
Noncanonical PRC1 (PRC1.1)
18608741
Noncanonical PRC1 (PRC1.3/1.5)
18608741
Noncanonical PRC1 (PRC1.6)
18608741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-rbx1
zf-Nse
zf-RING_11
zf-RING_10
zf-C3HC4_5
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
18608741
NCBI-ProteinID:
XP_007043637
UniProt:
A0AB32VKJ0
LinkDB
All DBs
Position
2:11178751..11186631
Genome browser
AA seq
491 aa
AA seq
DB search
MPAQKRSLPENLDDEESSLHHQSLSKQSRNEEDQHKPEDETTQLEEEQEPEPEQEQEQQQ
YHKHDPDDENHQVQLQGDNEDEDEEDEDDSDGSQSSTSQEKPEFVFVELPEIRKDVQCPI
CLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDALIAAL
YPDIDKYEEEELAFHEEERTRNKQIQASIAQIFQRQSEALVKRRSLGKESTGGFMTRSQR
NHRSTHPRRRRNSRGAEHQGSEDNEDENDDNGGRDSSSTDERCTEVRQRRRKRRAGIRPS
QPSSSVVNSDGGCVENDTEVSRDSRGISPGLVWNTDKLAWGAGGARSHTRHGNSGGGSGK
SSRARLSRLVEYLRSLEESNDELDVHLKLISVDEHSTSSLQQPYLCCRPSLSVKQLCEYI
ALQTPLRAEEVEILMVKGQYNTDDNHSIPTPLTSEDALQILEGQETLAGLKVKSSSGRNH
LILAYRQKQTS
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgccagcccagaagcggtcattgccagagaatctcgacgatgaagagtccagccttcat
caccaaagcctctccaagcaatctcgaaacgaagaagaccaacacaaacctgaagatgag
acaacgcaactggaagaagaacaagagcccgagccagagcaagagcaagaacaacaacaa
tatcataaacacgacccagatgacgaaaaccaccaagtacaactccaaggcgacaacgaa
gatgaagatgaagaagatgaagatgattctgatggaagccaatcttctacttctcaagag
aaacccgaatttgtctttgtggaacttccagaaattcgcaaagatgttcaatgtccaatt
tgtttaggaatcataaagaaaacaagaactgtaatggaatgtctgcatcgtttttgcaga
gaatgcattgacaaatcaatgcgactggggaacaatgagtgtccggcttgccgtacacat
tgtgcaagtcgacgttctctcagagatgatccaaactatgatgcattaattgcagcttta
tatccagatattgataagtatgaagaggaggaattggcttttcatgaagaagaaaggact
cgcaataagcagattcaagcatcaattgcccaaatatttcagagacaatcagaagcactc
gttaaacgacgtagtcttggtaaagagagcacaggtggctttatgactaggtcacaacgc
aatcatcggagtactcatccacgtaggagacggaactctcgaggggctgagcatcaagga
tctgaagacaatgaggatgaaaatgatgacaatggaggcagagattcatcttccactgat
gagcgctgcacagaagtgaggcagagaaggcgcaaaagacgggctggaattcggccatcc
cagccttcttcatcagtggtaaactcagatggtggctgtgttgaaaatgatacagaggtg
tctagagacagcagaggaatttctcctgggcttgtctggaacacagacaagcttgcttgg
ggggcaggtggtgctcggagtcacactcgacatggaaattctggcggtggcagtggcaag
agttctcgtgctcgcttaagcagactggtagagtacctgcggagcttggaggaaagcaat
gatgagttggatgttcatctcaagcttatatctgtggatgaacacagtacatccagtttg
cagcaaccctacctttgttgtcggcccagtctgtcagttaagcagctatgcgaatacatt
gctctccagacaccattgcgagctgaagaagtagaaatactaatggtaaagggacaatac
aacactgatgacaaccactccatcccaactcctttgacctcagaggatgcgctacaaatt
ttggaaggtcaagaaactttggcagggctcaaagtcaagagcagttctggaagaaatcat
ttgattctagcatatcggcagaagcaaactagctag
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