Theobroma cacao (cacao): 18608761
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Entry
18608761 CDS
T02994
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
tcc03015
mRNA surveillance pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18608761
09122 Translation
03013 Nucleocytoplasmic transport
18608761
03015 mRNA surveillance pathway
18608761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18608761
03041 Spliceosome [BR:
tcc03041
]
18608761
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
18608761
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
Cap binding complex
18608761
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
18608761
NCBI-ProteinID:
XP_007043674
UniProt:
A0AB32VIT5
LinkDB
All DBs
Position
2:11405585..11408564
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AA seq
270 aa
AA seq
DB search
MCRKYSFILEDLNKAKAMALLFKEQAKLSAYRDRKFSGTQEEFEQALLNSTTVYIGNMSF
YTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKYISGTILDDR
PIRVDFDWGFVEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQRELEAQRQLVDYGAG
SLGSFPPVMPPHYGRHGGGHGHGSSYRQGRDYNRKRHRDDDRYAHGSSKRTSDHEFRRNS
DNDSRPEKNPRFRESGDSDDDEEDDRKQRP
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagaaaatacagttttattttggaagatttgaacaaggcaaaggcaatggcttta
ctgttcaaggaacaagctaaactttcagcttaccgggacagaaaattcagtggtacgcaa
gaggaattcgagcaagcactcctgaattcgacaaccgtctacatcggaaacatgtcgttt
tacacaactgaagaacaagtttacgagcttttctcgcgagccggtgaaattaagaaaata
atcatgggccttgacaagaactctaaaacaccttgtggcttttgcttcgtcttgtattat
tctagggaagatacagaggatgctgtaaaatacattagcgggacaattctcgacgaccgt
ccgattcgtgtagattttgattggggatttgttgaaggaaggcaatggggtcgtggtcga
agtggtggccaagtgcgagatgagtatcgaactgattatgatcctggcagaggtggctat
ggaaaattagttcagagagagttggaagcgcaaaggcagcttgtagattatggtgctgga
tcactgggctcattcccaccagttatgccccctcattatggtaggcatggtgggggccat
ggtcatgggagttcttatcgtcaggggagagattacaatcggaagcgacaccgagatgat
gaccgctacgcacatggttcctcaaagagaacctcagatcatgaatttaggagaaactct
gacaatgactccagaccggagaagaatccacgttttcgtgagagtggtgattctgatgat
gatgaagaagatgatcggaaacagcggccttaa
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