Theobroma cacao (cacao): 18608919 Help Entry 18608919          CDS       T02994                                  Name (RefSeq) uncharacterized LOC18608919   KO K18730   PERQ amino acid-rich with GYF domain-containing protein Organism tcc  Theobroma cacao (cacao) Brite KEGG Orthology (KO) [BR:tcc00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tcc03019]     18608919 Messenger RNA biogenesis [BR:tcc03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      18608919    Surveillance factors     Other surveillance factors      18608919 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  GYF Motif Other DBs NCBI-GeneID:  18608919 NCBI-ProteinID:  XP_017971101 UniProt:  A0AB32VYT9 LinkDB All DBs Position 2:14870868..14879943 Genome browser AA seq 1601 aa AA seqDB search MAEGKLDLPDDLLSSKPSDRSWTSKVEALGGNDEKLDDSKDQLASESSIPLSPQWLYAKP TETKMDTRVPTSMSTGNFSDPNQKEGWRLDGSEEKKDWRRVVTESESSRRWREEERETGL LSGRRDRRKGERRVDTASMRETTESRSLSSSDRWHDGNSRNPGHESRRDSKWSSRWGPED KEKESRSEKRTDAEKEKEDTHNDNQSFVGSNRSVSERDTDSRDKWRPRHRMEVHSSGSTS SRAAPGFGPEKGRVENHNPGFTIGRGRSAGIGRSSSASTIGAIYSFRSETVPGKPNLLAD TFRYPRGKLLDIYRRQKLDPSFAAMPDGKEESPPLTQVGIVEPLAFVAPDAEEEAILGDI WKGKVTSSGVVYNSCRQGRSNENVSEVGDVESSEEKQGILSQKLSGATVDPLQEAASTDA HRAHVVAGKGVTHEEVDRISSSPRPPNSDGFVPTIPKTNGICSAMEVGSTHHNISENWQM DFASSGHPQFEGNESTPSSDIKLNLPGDSSSLFHVAFEQNQSSDGQLMESNSKAKSVGGG TSLEEFTLFYVDPQGNTQGPFLGADIIMWFEQGFFGLDLLVRLADSPEGTPFQELGDVMP QLKAKDGHGSVIDLNKLEESGAFGVNLEASLPASAPVSNIPASSIENDLHHSVSEVNSLS FQHVQSRISEPEAPLQMPHSEGQNFEDFVAQDEEIVFPGRSDNSGNPVAKSSGHVHDPLA NSSNHLSLPIELTETCMPNQNNSKLHHFGLLWSELESAQSRNNQSSNGIGRAASYGPAAD PAVAGGESWSDVYRKSVLPDNNLYQDVLAARHMLHVEQESNHFDLAEQLMSQQAQKQQFQ QLNMLSPHARLNESVLEHVPSQNQNLVRQRQLSNHSAPDMEHLLALEMQQQRQLQLQQYQ LQQQLQFHQQQKLLQERQQSQVQQVLLEQLLHGQVPDPGLGQSYLDPILSKNVLDQILLE QQLIHELQHQSHNHQRHVPSIEQLVQAKFGQAPQEEPQRDLFELISQAQHGQLQSLEHQL LQKEQLQRQLSMGLRQHNEQRDLDSIWPADRTNQLLRSHAGINQVHSSGFSPLDFYQQQQ RPIHEEPLSHLERNLSLRDQLNQVRFEPSSLQFERSMSLPAGASGVNMDVVNAMARAKGL DVLEPSTHIQSTGQAVTFSSGIHPHNPHHSLVPDQGHVSQLDANEGRWSESNGQLGNDWL ESQIQKLCINSERQKRDLEVKMTSENPGLWMSDGLNEDKSRQLLMELLHQKSGHHPESLD RASSGIYTGSSSLDHPFGVLAEQEAGLNKSFMVGSYGSSSSEPSHISLADKQAGSLESNE RLPFRAESGAFSEGQPFLSRIGENTQAIYRGANMTGLLTAAKELPDLECRNYGSKSDALT MGSMFEGQDGKAKPGRLASAEKGEIPINALSRHSSLGVSGGNAGFYGDQIGSCNLFSEDI AKDCVQVPAKAQDNMLLRHIPVSRTSSSQEGLSDLVSNPGSRGKNSLSSNEGGKRDFEGH VANHLDIAASAKKEMRFRRTSSYGDGDVSEASFIDMLKSNAKKNATAEVHGTAGPESSDG TQGGRGGKKKGKKGRQIDPALLGFKVTSNRIMMGEIQRIDD NT seq 4806 nt NT seq  +upstreamnt  +downstreamnt atggctgagggcaagctcgatctaccggacgatctcctttcatctaagccgtctgatcgc tcctggacctccaaagtggaagctttgggaggaaacgacgaaaaacttgatgattcgaaa gatcaactggcatcagagagcagcatacctttatctccacaatggctctatgctaaaccc accgagacaaaaatggatacacgtgttccaacttctatgtctactggaaacttcagtgat cccaaccagaaggagggctggcgcttggatggatctgaggaaaaaaaagattggaggagg gttgtgactgagagtgaaagcagccgccgctggcgtgaagaggaaagagaaactggctta ctcagtggtaggagagatcgcaggaaaggagagcgtcgtgttgacactgcttcaatgagg gaaacaactgaaagtagatctttgtcatcctctgatcggtggcatgatggtaacagccgc aatcccgggcatgaatctcgccgtgatagcaaatggtcgtctaggtggggtcccgaagac aaagagaaggaatcccgctctgagaagaggacggatgctgaaaaggagaaggaagatact cacaatgacaatcagtcatttgttggtagtaaccgttcagtttctgagcgtgacacagat tctcgtgataaatggaggccacgccatagaatggaggtgcattcaagtggatcaacttcc tctcgtgctgcacctggatttggacctgagaaaggaagggtggagaatcataatcctggt tttaccattggacggggaaggtcagctggtatcggaaggtcttcatctgcaagcaccatc ggtgccatttactcatttagaagtgaaactgtccctggaaaaccaaaccttttagctgat acttttcgctatcctagagggaagctgcttgacatttatcgcagacaaaagcttgatcca tcttttgctgccatgcctgatgggaaggaagaatcacctcctttaactcaagtgggcatt gttgaaccattggcttttgttgcacctgatgctgaagaggaggctatccttggtgatata tggaagggtaaggtcaccagcagtggtgtagtgtacaattcctgtagacaggggaggtca aatgaaaatgtgtcagaagttggagatgtagaatcctctgaggagaaacagggtatcctc agccaaaaactcagtggagcaactgtcgatcccttgcaagaagctgcaagtactgatgca catcgagctcatgtggtagctggaaaaggagtcactcatgaagaagtggatagaatttct tccagccctcgtccaccaaattcagatggatttgtaccaacaatccctaaaactaatggc atttgcagtgccatggaggttggttctactcaccataacattagtgaaaattggcagatg gactttgcttcttctggccatcctcaatttgaaggcaatgagtcaaccccttcttctgac atcaaattgaatcttcctggtgattcaagttctttatttcatgtggccttcgagcaaaat cagagtagtgatgggcagctaatggagagtaacagtaaggcaaagagtgtgggaggggga acttctcttgaggagtttactttgttttacgttgatcctcaggggaatacacagggtccg ttccttggggctgacatcataatgtggtttgaacagggtttctttgggcttgacttgcta gtacgtctggcagattctcctgagggaacaccttttcaagaattgggtgatgtcatgcca cagctgaaagccaaagatggacatggcagtgttattgatttgaataaactagaagagtct ggggcttttggagtaaatttggaggctagtttacctgcttctgctccagtcagcaacatt ccagcttcatccatagaaaatgacctgcaccactcagtgtctgaggttaacagcctctca tttcagcatgttcagtcaagaatatctgagcctgaggctccactgcaaatgccacattct gagggtcaaaattttgaagattttgttgcacaagatgaagaaattgtattcccaggaaga tcagataattctggcaatcctgttgcaaaatcttctggccatgttcacgatcctttggca aattctagtaaccacctgtctcttcccattgagttaacagaaacttgtatgccaaatcaa aataatagtaagttgcatcattttggcttattgtggtctgagcttgaaagtgctcaatca aggaacaaccagtcttccaatggcattgggagggctgcttcatatggtcctgcggctgat ccagctgttgctggaggagagtcatggtctgatgtttataggaaaagtgtacttcctgac aataacttgtatcaagatgttttggctgctcgccatatgttgcatgtggaacaagaatca aaccattttgatttagcagagcaacttatgtctcaacaagctcagaaacagcaattccaa cagctgaatatgttgtctcctcatgcacgccttaatgaatcagttctggaacatgtgcca agtcagaatcagaatttggttcgccagcggcaattgtccaaccattctgcgccagatatg gaacaccttttagctctagagatgcaacaacagcggcagcttcagctccagcagtatcaa ttgcagcaacagctacagttccatcagcagcaaaagcttttacaggagcgacaacagtct caagttcaacaagttcttcttgagcaactgttgcatggtcaagtgcctgaccctggcctt gggcagtcatatttggatcctatcctatccaaaaatgttcttgatcagattttattggag cagcagcttatacatgagctgcaacatcagtcacataatcatcaaaggcatgttccatcg atagagcagcttgttcaagcaaaatttggtcaagcaccacaagaagagcctcaaagagac ctatttgaattaatttcacaggcacagcatggacaattgcagtctttggagcatcagctt cttcaaaaagagcagctgcagaggcagctctcaatgggattgagacagcataatgaacaa agggatctagactccatatggccagctgatcggaccaatcagcttctcaggagccatgct ggtattaaccaagttcattcttcaggctttagccccttagacttttatcaacaacagcaa aggcctatccatgaggagccgctaagtcacctagagcgcaatctttcgttaagggatcag cttaatcaagtgcgttttgagccttcctcattgcaatttgaacgatcaatgtctttgcct gctggtgcttcaggggttaatatggatgtagtaaatgctatggctcgtgcgaaaggttta gatgtgctggagccaagcacacatatacaatctactggtcaagctgtaacattttcttct ggcatccacccccataatccgcaccactctttagtccctgatcagggtcatgtttcccaa ttggatgcaaacgagggccgctggtctgagagcaatggacagctgggaaatgactggttg gaatctcaaattcagaaattgtgtatcaattctgaacggcagaaaagggatttagaagtg aaaatgacttctgagaatcctggtttatggatgtctgatgggctcaacgaggacaagtcc aggcaattgttgatggaattgctgcatcagaaatctggccatcaccctgagtcattagat agggcctcatctggcatctatacaggatcaagttctttggatcacccatttggtgttcta gcagagcaagaggcaggtctaaacaagtcatttatggtaggttcttatggttcaagctca tctgaaccatcacatatttctttagctgataagcaggctggcagtttagaaagcaatgaa aggctgccatttagggctgaatctggagcattttctgagggacagcccttcctgtcacgt attggtgagaatactcaagcaatttatagaggtgctaacatgactggtttgttaactgcg gccaaagagttgccagatcttgagtgcagaaactatggatctaaaagtgatgcgctgaca atgggctcaatgtttgagggtcaagatggcaaggccaagccaggaaggttggcttctgcg gaaaaaggggagattccaattaatgctcttagcagacattcatcacttggtgtttctggt ggaaatgctggcttttacggtgaccaaattggatcatgcaatttattttcagaagatata gccaaagactgtgtgcaagtcccagcgaaagctcaagacaacatgttgttgaggcatata cctgtctctcgtacttcatcatctcaggaaggattgtccgatcttgtctccaatccgggt agcaggggaaaaaattctttaagcagcaatgagggagggaagcgagattttgaaggacat gtggctaaccatttggacattgcggcatcggccaagaaggagatgcgcttccgacgtacc tcgtcatacggtgatggtgatgtctctgaggcatcatttattgacatgttgaaaagtaat gcaaagaagaatgctacggcagaagtccatggaacagcgggcccagagtcttcagatggg acccaagggggcaggggcggcaaaaagaaagggaagaaagggaggcagattgatcctgca ctcctgggttttaaagtcacaagcaatcgcattatgatgggtgagatacaacgtatagat gattag

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