Theobroma cacao (cacao): 18609397
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Entry
18609397 CDS
T02994
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
18609397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18609397
Spliceosome [BR:
tcc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
18609397
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
18609397
NCBI-ProteinID:
XP_007044548
UniProt:
A0AB32VKV0
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Position
2:31158492..31162434
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AA seq
485 aa
AA seq
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MATLADSFLADLDELSDNEADVLEEENDDVTNMEEDVDGDLADIEALNYDELDSVSKLQK
TQRYIDIMQKVEDALEKGSDISNQGMVLEDDPEYQLIVDCNSLSVDIENEIVIIHNFIRD
KYRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTIDACDRALALDMAKKKVLDFVESRMGYIAPNLSTIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKTLAGFSTATSQFRVGYIEQTEIFQSTPPALRSRACRLLASK
ATLAARIDSTRGDPSGNAGRTLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAA
KVAKKFKEKHGGSSGATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFS
KIKRT
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgctgattcatttcttgcggaccttgatgaattatcggacaacgaagcc
gatgttctcgaggaagaaaatgatgatgtcaccaacatggaagaagatgttgatggtgac
ctggccgatattgaagcccttaactacgatgagctggacagcgtttcgaaattgcaaaaa
actcagagatacattgatataatgcagaaagtggaagatgcactcgagaagggttctgat
atatcaaatcagggaatggtattggaagatgatcctgagtatcagctgattgtggactgt
aattcactatcggttgacattgagaatgagattgttattatccataattttatacgtgat
aagtaccggttgaagtttcctgagcttgaatcacttgtacatcatccgattgattatgct
cgtgtagtgaaaaagattggcaatgagatggatttaaccctggttgatttggaaggactt
ttgccttcggctatcattatggttgtttcagttacagcatcgactactagtggcaagcca
cttccagaagatgttcttcaaaaaactattgatgcatgtgatcgtgctcttgctttagac
atggcaaagaaaaaggttcttgattttgtagaaagtagaatgggatatattgcaccaaat
ctttctactattgttgggagtgctgttgctgctaaacttatgggtactgctggtggtctt
tcagcgttagctaagatgcctgcttgtaacgttcagctgcttggtgcaaagaaaaagacc
cttgcagggttttctactgcaacgtcacaatttcgtgttggttatattgaacagacagag
atttttcaatctacacccccggctttgagaagtcgtgcttgccgtctcttggcttcaaaa
gcaacacttgcggcacgaatagattctactcgaggggatccatcagggaatgctggaaga
actctgaaggatgagatccataagaaaattgaaaagtggcaagagccacctcccgcaaag
cagcctaaaccccttcctgttcctgattctgaacctaagaaaaagagaggtggccgtcgc
ttaaggaagatgaaggagaggtatgctataacagacatgaggaaactggcaaacaggatg
caatttggtgtacctgaggagagctccttaggtgatggactcggtgaaggctatggaatg
cttggtcaggctgggagtggaaaactgcgtgtatcagttggtcagagcaaacttgcggca
aaagttgctaagaagttcaaggaaaagcatggcggaagcagtggtgctacctctggactg
acttcaagtttggcattcacacctgtgcaggggattgagctcacaaaccctcaagctcat
gcacatcagcttggcagtggaactcaaagtacttatttctctgagactggaaccttttcg
aagatcaaaaggacatga
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