KEGG   Theobroma cacao (cacao): 18609596
Entry
18609596          CDS       T02994                                 
Name
(RefSeq) coilin
  KO
K13150  coilin
Organism
tcc  Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcc03041]
    18609596
Spliceosome [BR:tcc03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    18609596
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N
Other DBs
NCBI-GeneID: 18609596
NCBI-ProteinID: XP_007044843
UniProt: A0AB32VGW8
LinkDB
Position
2:33497382..33502423
AA seq 640 aa
METTRLRLLFEDRNILNKSQKKQGLKRSWILLKPQHQTILDLSSHLLYVFHLHRSCPHGL
ILSMDGFVLPPFESTCIFKDKDIISVKKKGGKRTEIIKVGDGLNSLEELEIVEQPPVNTG
VKLLASKEFDKQTGGYESEPEEDEQELEPLENEEHVESTPIQNIVSKKRKASEKLPRPKR
KKSKLSRARKSPVSVDNGNDVHHKKSKSSHQRTVLPEEKVIGKDNPVDIQGEPDKLSNPE
TDESSDDDTNVGRFPQLQETGKGSVVVSQTTSEAKKPPSRSARRKKAKRRWLREQAIIEK
EKLPSKQLLGKDNQQSPAKENLEVSEEHLQPVGNSSVKDYMVPVVIRPGHIRFEPLETED
AERAVQQSQISVETFQWNGITSKKKGQKWGKEKTPFLKRNDDKSFSQVSTEMVAIEEKAT
ITDDMDFDKLMPYSSLPKEGDFVAYRLVELSSSWTPELCSFRVGKISDYDAESNRIILTP
VPEYPNASEKKIDEDESELQSDTSLYGEDGSLEIDYTSLIDVRLIKHGNSNTIISVAGGI
SENCAEDPNVLKNRQPNGSKEAALVSAPPLAQANGVVNGWEEISQALSAKKVELSKEDGW
SQTDSSGRSSWSYRALRRSALGPTMAFLRAQNGIMGASPT
NT seq 1923 nt   +upstreamnt  +downstreamnt
atggagacgacaaggctccgtttgctgttcgaggatcgcaacattctgaacaagtcacag
aagaaacaaggactaaagcgaagctggattctccttaaaccccaacaccaaaccatcttg
gatctttcctctcatcttctctacgttttccacctccacagatcttgcccgcacggcctc
atcctttccatggacggctttgttttgccacctttcgagtcaacttgtattttcaaagat
aaagatattatcagtgtgaagaaaaaaggaggtaagcggactgagattattaaggtaggt
gacggtttgaattctttggaagaattagaaatagtagagcaaccgcctgtgaatacaggc
gtgaagcttctagccagtaaggagtttgacaagcaaactgggggatatgaaagtgaaccg
gaagaagatgaacaagaactcgagccattggagaatgaggaacatgtggaaagcactcca
attcaaaacattgtttcaaagaaaagaaaggcatcggagaagcttcccagacctaagagg
aagaaaagtaaactgtctagggccagaaaatctcctgtttctgtagataatggaaatgat
gtccatcacaagaaaagcaaaagctctcatcagcgaactgttctccccgaagaaaaggtt
attgggaaggataatccagttgatatacagggagaaccagataagttaagcaaccctgaa
actgatgaaagtagtgatgatgataccaatgtgggaaggttcccccagcttcaagaaact
ggcaaagggagtgtggttgtatctcagacaaccagtgaagctaaaaagccccctagcaga
agcgcacgacgtaaaaaagccaaaaggcgatggttgagggagcaggccataattgaaaag
gaaaagctgccttccaaacagctgcttgggaaagataatcagcaatcacccgcaaaagag
aatctcgaagtttctgaagaacatcttcaaccagttggcaatagcagtgtcaaggattac
atggttccagtagtaattaggcctggacatattcgctttgagcccctggaaacagaagat
gcagagcgagctgtccaacaaagtcaaatttcagtggaaacctttcaatggaatggaata
accagcaagaagaagggtcaaaaatggggcaaggagaaaactccatttctgaaaaggaat
gatgataaaagttttagccaagtgagtaccgaaatggtggctattgaggaaaaggcaacc
ataactgatgacatggactttgacaagcttatgccctattctagcttgcctaaggaggga
gattttgttgcatatcgcttagttgagctatcatcatcttggacccctgagctttgctcc
ttccgagttgggaaaatatcagactatgatgctgaatccaacaggatcattctgacacca
gtgccggaatatccaaatgcttctgagaaaaagatagatgaggatgaatctgaactacaa
tcagatacatccctttatggagaagatggctcattagagatagattatacctctctaatt
gatgtccgtctcatcaagcatggcaactcaaataccataatatcagttgctggtggcatc
agtgaaaattgtgcagaagatccaaatgttttaaaaaatagacaaccaaatggcagcaag
gaagcggcccttgtctcagcccctcctcttgctcaagctaatggtgtcgtaaatgggtgg
gaagaaattagccaggctttgagtgcaaagaaggtggagctctctaaagaggatggttgg
agtcaaacagatagttcaggtaggagctcgtggtcctatagggccctaagacgcagtgcc
ctgggcccaactatggctttcttaagagcacaaaatgggatcatgggagcatcaccaaca
taa

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