Theobroma cacao (cacao): 18609611
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Entry
18609611 CDS
T02994
Name
(RefSeq) protein GLE1
KO
K18723
nucleoporin GLE1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18609611
03015 mRNA surveillance pathway
18609611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18609611
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18609611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
18609611
NCBI-ProteinID:
XP_007044871
UniProt:
A0AB32VJ87
A0A061E7X2
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Position
2:complement(33605443..33616072)
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AA seq
645 aa
AA seq
DB search
MGVVKLEIRCPQTVNGIGLDPDPDWSFDALLPEIDSLEKKLNVSSSVPLPFTKTKSREFY
AENGIKRSPNAFVMRISDEEFEDSEGEAEEVHDRGLVKATRFNCDEFYLSDDDSDNESSL
QVQTYFMNEVGLVESALVELTHEHQLGVREEIRSKISSLETDFMNESEKSSSAHVKVDKY
REARREVERKFDVQYQRRLAEALDNHLTAVQRDHELKSQIAERRIRSDAAHEEAKRREKA
LQEERLRQEKAKAEAEAKLKAEEAKRVALEAERRAAKEAAEREADKASKANTSEVSQTEA
LGGPTATSSVVLNAQPKGSDADKTMKSYSAGNMLRAAESALNLERERLQKLKELDERNQS
LRSSSNEDFGSTERHIARLIRQIRGTKDNVRTKATELIKIFNNPRCPQTISIASFAKKVV
SHCESPDNAAFACGHVIVLVTSQFPQAMDLLVAELQRACIYTVPKHISYSKSAFESKVAY
WKAIGYREDDGKIESTKDYLKRLESYMKLYGALVQTEVAGGQNVHGLKEGWAWLARFLNA
LPANIYTAVALNAFLQMAGFALFRKYKSQFMKLLNIISENFLNALRAQQDPELRPIMAEI
QSYLEDKKFLQEPEGRALQGSLLSSVMVPDSDYQESYHQPNRYFY
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttaagttggaaattcgctgccctcaaaccgttaatggaatcggtcttgat
cccgacccggattggagtttcgatgctttgttaccagagatcgattccttggaaaagaag
ctcaatgtctcttcttcagttcctttgccttttacaaaaacaaaatcaagagaattttat
gcggaaaatggcatcaagaggagcccaaatgcatttgtaatgagaatatctgatgaggag
tttgaggatagtgaaggtgaggctgaggaggttcatgatcgagggttagtgaaagctaca
cgatttaactgcgatgaattttatttgagtgatgatgattctgacaatgaatcgtctctt
caagtacaaacctacttcatgaatgaggtgggattggtggagagtgctttagttgagtta
acccatgagcatcaacttggagttagggaggaaattaggagcaaaatctcgtcattagag
acagatttcatgaatgagagcgaaaagtcttcctctgcacatgtgaaagttgacaaatat
agagaagcaaggcgggaagtggagaggaaatttgatgttcagtatcaacgcagacttgca
gaagcacttgataatcacttgactgctgtccagcgggaccatgaactcaaatcacaaata
gcagaaaggagaatacgaagtgatgcagcacatgaagaggccaagagaagggaaaaggca
cttcaagaagaaagactacgccaagaaaaggccaaagctgaggcagaggctaaacttaaa
gctgaggaagccaaaagagttgctttggaagctgagaggagagcagcaaaagaagcagca
gaaagggaagcagataaagcctcaaaagctaatacttctgaagtgtcacaaacagaagct
ttaggaggcccaacggcaactagttcagtagttttaaatgctcagcccaagggctctgat
gctgataaaacaatgaagtcatattcagcaggtaacatgctcagggctgcagagagtgct
ttaaatctagagagggaaagactacaaaagttaaaagagttggatgaaagaaaccaatca
ctgagatcaagctcaaatgaggattttggcagcactgaaaggcatattgcgaggttgata
agacaaataaggggtacaaaagacaatgtcagaacaaaagccactgagcttataaagatt
ttcaacaatcctcgttgccctcagaccatcagcattgcatcttttgctaagaaggttgtt
tctcactgtgaaagccctgataatgctgcctttgcctgtggtcatgtcattgtccttgta
acatcgcagttcccacaagcaatggatcttcttgttgctgaactacaaagggcttgcatt
tacactgtcccaaagcatatatcatactcaaagtcggcatttgaatcgaaagtggcatac
tggaaggctataggataccgagaagacgatgggaagattgaaagtacgaaggattatttg
aaacggttggaatcttacatgaagctgtacggggcactggttcagactgaggttgcaggt
ggccaaaatgttcatgggcttaaggaaggttgggcatggcttgctaggttcctaaatgca
ctccctgccaatatttatactgctgtggctttgaatgcatttctgcaaatggcaggcttt
gctctcttcagaaaatacaaatctcagttcatgaagttgctgaatatcatctccgagaac
tttctaaatgccttgagagcccaacaagatccagagctgaggcctattatggccgagatt
cagtcttacttggaagataagaaattccttcaagaaccagagggaagggctttgcaaggt
tctttgttatcaagtgtcatggtgcctgactcagattaccaagagtcgtatcatcaacca
aacagatatttctactaa
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