Theobroma cacao (cacao): 18609855
Help
Entry
18609855 CDS
T02994
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18609855
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
18609855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
18609855
NCBI-ProteinID:
XP_007045240
LinkDB
All DBs
Position
2:36267067..36281268
Genome browser
AA seq
1606 aa
AA seq
DB search
MDQTPRSVAAAANSRAYQFHPARAAITDLFNLYLGRSSHQKADDSIRELPNKTQKRVLAL
NRELPPRNEQFLLDFEQLQTQFGDQDQLRSVTESVLISLVIQCCSHAPRAEFLLFALRSL
CNIGYINWDTLLPALLSSVSSAEVPAGQGSQGVPSVSTTSLSQSGMMPSTSVITNTSSFQ
SSNPVSTLTSVHGIGSPAQSTIEPLPGATLSPVKSSDISSNGQPSTTRMNSSIRDNAISS
LRQLCCKIILTGLECSLKPVTQAEIFCHMLNWLVNWDQRQQGSEECDGKTWRPDKALIEW
LHSCLDVIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMAVHMQ
MLDQHLHCPTFGTHRILSQTTPNVSVEAVANLRYSPITYPSVLGEPLHGEDLAASIQRGS
LDWERALRCIRHAIRSTPSPDWWKRVLVVAPCYRGSAQVPTPGAVFTSDMICEATIDRII
ELLKLTNSEINCWQEWLVFSDIFFFLMKSGCIDFVDFVDKLGSRLTESDHHILRTNHVTW
LLAQIIRVEHVMAALNNDSRKVETTKKILSFHREDRSSDPNNPQSILLDFISSCQNLRIW
SLNTTREYLNNEQLQKGKQIDEWWRQVSKGERMMDYMNMDDRSIGMFWVVSYTMAQPAAE
TVMNWLSSGGATELLSAATVQPNERLMVMQEVSPLPISLLSGFSMNLCLKLVLQLEESLF
IGQVVPSIAMVETYTRLLLIAPHSLFRSHFSHLAQRNASLLSKPGVTLLVLEIVNYRLLP
LYRYQGKCKTLMYDVTKIISALKGKRGDHRVFRLAENLCINLILSLRDFFSVKREGKGPT
EFTETLNRITIITLAITIKTRGIADADHLLYLQTMLEQILATSQHTWSKKTLRHFPPLLC
DVLITRIDKRGLAIQAWQQSETTVINQCTQLLSSSADPNYVMTYIRTSFPQHRQYLCAGA
WILMQGHPENINSGNLARVLREFSPEEVTANIYTMVDVLLHHIHMELQHGHSLQDLLLKT
CANLAFFVWTHDLIPLDILLLALIDRDDDPHALRIVISLLDRQEFQQRMNLYCLNRNSPE
HWLHTAIFKRTDLQKALGNHLSWKDRYPTFFDDIAARLLPVIPLIVYRLIENDATESADR
ILAMYSPFLAYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDLRKIPFSESFPQHISSS
NPAMCPPLEYFATLLLALVNNVIPPLNSNSRSGSMGDASNNAMRGPHNRTPPTPHSGPAN
ASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPISASQIVSSLVQIVVNIQPTLIQSSNG
LHGPSSGLGQGSVLPTSPSGGSTDSLSAGRSTPSVSGINTSSFVSRSGYTCQQLSCLFIQ
ACGLLLAQLPREFHLQLYMEASRIIKESWWLTDGQRSPGELDSAVSYALLDPTWASQDNT
STAIGNIVALLHAFFSNLPQEWLEGTHDIIKHLRPVTSVAMLRIAFRIMGPLLPRLANAH
NLFNKILSLLLNILVDVFGKNCQPPVPVDASEIMDLIDYLHHVIHYEGQGGPVQASSKPR
PEVLALCGRAAESLRPDVQHLLSHLKTDINSSIYAATHPKLVQNPS
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaccccgagatcagtggcagctgctgcaaattcccgggcctaccagttccac
cctgcccgagctgccattaccgatctcttcaatctctatctaggaagaagtagccaccaa
aaagctgatgattctattcgagaactgccgaacaaaacccaaaagcgtgtgctagctctt
aacagagagcttcctcctcgaaacgagcagttcctgttagattttgagcaacttcagact
cagtttggtgatcaagatcagttgcggtctgtgacagaatctgttctaatatctttggtt
attcagtgttgtagtcatgcaccacgggcagagtttcttctttttgctttacgtagcttg
tgcaatataggctacatcaattgggatacccttttgccagcacttctttcttcagtttcc
tctgcagaagtgccagcaggtcaagggagtcagggagtgccttctgtatcgacaacaagt
ttatcacagtctgggatgatgccatctactagcgtaatcactaatacttctagctttcag
tcctctaatcctgtctctacgttaacttcagttcatggtattgggtctccagcccaatct
acaattgaaccattacctggtgcaactttatcccctgtaaaatcatctgatatttccagc
aatggtcaaccgtctacaactagaatgaattcatctataagagataatgctataagcagt
ttacgtcagctatgttgcaagatcattttaactgggcttgaatgtagtttgaaaccagtg
actcaagctgaaattttctgccatatgctgaattggctggttaattgggatcaaagacaa
caggggagtgaggaatgtgatggaaagacctggagaccagacaaggctctaattgaatgg
ctacacagttgtttggatgtaatttggctgttggttgaggaagataaatgccgagtgccg
ttttatgaattacttcgaagtggattgcagtttatagaaaacatcccagatgatgaagca
ttgtttacacttatcttggaaatccataggaggagagatatgatggctgtgcatatgcaa
atgttagaccaacaccttcattgccccacatttggaactcatcggattttgtcgcagaca
actcccaatgtttctgttgaagctgtggcaaacttgcggtattcaccaattacatatcca
agtgtgcttggagaaccactgcatggagaggatcttgcagcttctatccagaggggtagt
ttggactgggagagagctttgcgttgtataaggcatgctattcgttctactccttctcct
gattggtggaagcgtgtgcttgttgtggcaccttgctatcgaggttctgctcaagtgcct
actcctggtgctgtttttacctctgatatgatttgtgaggcaacaattgatagaattatt
gagcttttgaagttgacaaattcagaaataaattgctggcaggagtggcttgtcttctca
gatatattcttctttcttatgaaaagtggttgtatcgattttgttgattttgtcgataag
ctgggctcacgccttacagagagtgatcaccatatacttcggacaaatcatgtgacctgg
cttcttgcccaaatcattcgggtggagcatgtcatggctgctttgaataatgattccaga
aaggtggagacgacaaaaaagattctatcatttcatagagaagataggagctctgatcct
aataatccccaaagcatcctgcttgattttattagcagttgtcaaaacttacgcatttgg
tcgttgaatacaaccagagaatatctgaataatgaacagttgcagaaagggaagcaaata
gatgaatggtggagacaagtgagcaaaggggaacgcatgatggattacatgaatatggat
gatagatcaattgggatgttttgggttgtgtcctacaccatggcacagccagctgctgaa
acagttatgaattggttatcttctggtggagctacagagttgttatcggctgcaactgta
cagcccaatgagagattaatggtgatgcaggaagttagtccattgccgatatcactgcta
tctggcttttcaatgaatctttgtttgaagttggtcttgcaattggaagaatctttattc
attgggcaggttgttcctagtattgctatggttgaaacatacaccagattgctgctcatt
gcacctcattcattatttcgttcacactttagtcatttggcacagaggaatgcttcttta
ttgagcaagcctggggtgacacttttggtgcttgaaattgtgaactatcgcctgcttccg
ctctacaggtaccaaggaaaatgcaaaactctgatgtatgatgttacaaaaataatttct
gcattaaaaggaaaacggggagatcatcgtgtctttaggttggctgagaacttgtgcata
aatctgattttgtcattgagagactttttctcagttaaaagggaagggaagggccccact
gaattcacagaaactttaaatcgaataactataatcacacttgccatcaccattaaaaca
cgtggaattgcagatgctgatcacttactttatcttcaaactatgttagaacaaatactg
gcaactagccagcatacatggtcaaagaaaactctacgccattttcctcctcttctttgt
gatgtcttaattacacggatagacaaaagaggactggcaattcaagcatggcaacagtct
gaaacaacagtgatcaaccaatgcacccaacttctttcatcatctgctgatccaaattat
gttatgacttatatcagaaccagttttcctcaacaccggcaatatctatgtgctggtgca
tggatactgatgcaagggcaccctgaaaacattaatagtggaaacctggcacgggtgttg
agggaattttcacctgaagaagtgacagcaaatatttatacaatggttgatgtattactt
catcacattcatatggagcttcagcatgggcattccttgcaggaccttttattgaaaact
tgtgcaaaccttgccttttttgtttggactcatgacctgattcctttggatatattgcta
ctggcactcattgatcgtgatgatgatccccatgccctccgtattgtgataagcttactt
gacaggcaagagtttcaacaaaggatgaacttatattgtttgaatcgtaactcccctgag
cattggcttcacactgcaatatttaagcgcactgatttgcaaaaggcccttggcaatcat
ctctcctggaaggacaggtatcctacattctttgacgatattgcagcacgtttgcttcca
gtcatccccttaattgtctatagacttattgagaatgatgctacagaatcggctgacagg
attctggcgatgtattctccatttttagcttaccatcctttaagatttacatttgttcgt
gacattcttgcatatttctatgggcatttgcctggaaagctcattgtgcgaatattgaat
gtacttgatctcaggaagatccctttttccgaatcatttcctcagcatattagttcatca
aatcctgcaatgtgcccacctctagaatattttgcgactcttttgttggctcttgtgaat
aatgtaatacccccattaaacagcaactcaagaagtggatcaatgggagatgcttctaat
aatgcaatgcgtggtcctcataacaggacaccaccaacacctcattctgggccagcaaat
gcttctgagggtcaaaaggcattttatcaaattcaggaccctgggacatatactcagctg
gttctcgaaacagctgtcatagaaatactctctcttcccatatctgcttctcagattgtg
tcatctctagttcaaattgttgttaacatacaaccaacactgattcaatccagcaatggt
ctgcacggaccttccagtggtctggggcaaggttcagttttaccaacatccccttcagga
ggcagcacagattccttgagtgcaggcagatcaactccttcagtttcagggatcaacacc
tctagttttgtttcacgaagtggttatacatgccaacagctatcatgcttatttatccaa
gcttgtggtctgttgttggcgcagctccctcgtgagtttcacttacagctttacatggag
gcatcacgtataataaaagaaagttggtggctaactgatgggcaaagatcaccgggtgaa
ctagactctgctgttagctatgctttgttggatccaacatgggcttcccaagataatacc
tctacagccataggtaatatagttgccctgcttcatgctttcttcagtaacctcccacaa
gaatggttagagggaacgcacgacattataaaacatctcaggccagtaacatcagttgct
atgttgagaatagcattccgtataatgggccccttattgccaagacttgccaatgctcat
aatcttttcaacaagattctgtcattacttttaaatatactggtggatgtatttgggaaa
aactgtcagccaccagttcccgtcgatgcatcagaaataatggatctcattgactacctt
catcatgtcatccactatgaaggacagggagggcctgtgcaggctagcagcaagcctagg
ccagaagtcttggctctttgtgggagagctgctgaaagtctacgtccagatgtacagcat
cttctatcccacttgaaaactgatataaactcttcaatctatgctgctactcatccaaag
ttagttcagaatccttcctga
DBGET
integrated database retrieval system
