Theobroma cacao (cacao): 18609879
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Entry
18609879 CDS
T02994
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18609879
Spliceosome [BR:
tcc03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
18609879
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
18609879
NCBI-ProteinID:
XP_007045271
UniProt:
A0AB32VHB1
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Position
2:complement(36555797..36567763)
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AA seq
657 aa
AA seq
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MAIDCLVLGAGQEVGKSCVVVSINGKRIMFDCGMHMGYTDSRRYPDFSLISKTGDFDNAL
TCVIITHFHLDHIGALPYFTEVCGYRGPIYMTYPTKALAPLMLEDYRKNMDRRGEDGQFT
SDHITECMKKVIPVDLKQTVQVDKDLQIRAYYAGHVLGAAMFYAKVGDAAMVYTGDYNMT
PDRHLGAAQIDRLQLDLLITESTYATTIRDSRYGREREFLKAVHNCVAAGGKVLIPTFAL
GRAQELCILLEDYWERMNLKVPIYFSSGLTIQANMYYKMLINWTSQKIKETYATHNAFDF
KNVQNFDRSLINAPGPCVLFATPGMISGGFSLEVFMQWAPSEINLITLPGYCVAGTIGHK
LMSGKPTKIDLDKDTQVDVRCQIHQLSFSPHTDAKGIMDLVKFLSPKHAILVHGEKPKMA
TLKERIQSELGIQCYCPANNDTVTIPTTHYVKADALDAFIKSCLNPNFKFSKSSSVDKSY
SGSNDSKAIPGLQVSDERVAEGILVVEKGKKAKVIHQDELLHMLGENKHEVQFAYCFPMR
TERLEKTRSEDLPSADDLLCGLDKCTLISLLSTKLSNELSDGNIQDLGEQLQVESFCLSI
CLKDNCPHRISDSVQNDSEVVFCCCSWSVADEMLAWKIISIMNNYTLPLEGRLQVHI
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgactgcctcgtccttggggcaggccaagaggttgggaaaagctgcgtggtg
gtgtcgataaacggcaagagaattatgttcgactgtgggatgcacatggggtacaccgat
tctcgtcgatatccagatttctctctcatttcaaagactggagatttcgataatgctctc
acttgtgtcatcattactcactttcatttggatcatattggagcgcttccttacttcact
gaagtttgcggttataggggccctatttacatgacttatccgacaaaagcattggctcct
ttgatgttagaggattatagaaagaatatggatcgaaggggtgaggacggacaatttact
tctgatcatattacggaatgcatgaaaaaagttataccagtggatttgaagcagactgtg
caggttgataaagatcttcaaatccgtgcctactatgcaggacatgttcttggggcagca
atgttttatgcaaaggtgggagatgctgctatggtgtacacaggagattataatatgaca
ccagatagacatcttggggcagctcagattgatcgacttcagttggaccttcttataaca
gagtctacttatgcgacaaccatacgagattcaagatatggccgagagagggagttcctt
aaagctgttcataactgtgttgctgctggaggaaaggtgcttattcctacttttgctcta
ggaagagctcaggaactctgtatattattggaagattattgggagcgcatgaatctaaaa
gttcctatttacttctcatcaggtttgaccattcaagccaatatgtattataaaatgctt
attaactggaccagccagaagattaaggagacatatgccacacataatgcatttgatttt
aaaaatgttcaaaattttgaccgttctttgataaatgctcctgggccttgtgttctcttt
gcaacacctggcatgattagtggtgggttttcacttgaggttttcatgcaatgggcgcct
tctgaaataaatctcatcacattgcctgggtattgtgtggctggaacaataggacataag
ttaatgtcaggtaaacccaccaaaattgatttggacaaggacacccaagttgatgtgcgg
tgccagattcatcagctatctttcagtcctcatacagatgccaaaggaattatggatctt
gtcaaatttctctcacctaagcatgctatacttgtacatggtgagaagcctaaaatggct
actcttaaagaaagaattcagtcagaacttggaatccagtgttattgtcctgcaaacaat
gacacagtgaccattcctacaacccactatgtgaaagcagatgctttagatgcattcatc
aaaagttgcttgaatccaaacttcaagttctcaaaaagtagttctgtggataaatcttat
tcgggttcaaatgactcaaaggccattccaggactacaggtaagtgatgaaagagttgct
gaaggtatcttagtagtggaaaaaggcaaaaaggcaaaggttatacaccaggatgagctt
ctgcacatgttgggagaaaacaagcatgaggttcagtttgcttattgtttcccaatgcgt
actgaaaggttagagaagaccagaagcgaggacctcccatctgctgatgatttgctctgt
ggtcttgacaaatgcactttgatcagtctattgtcaacaaagctatccaatgaactctct
gatgggaacatccaagatttgggggagcagcttcaagtagaatcattctgtttgtccatt
tgtttgaaggacaattgccctcatagaatatctgatagtgttcagaatgattctgaagta
gtgttctgttgttgctcttggtcagtggcagatgaaatgcttgcatggaaaatcatttca
atcatgaataattatactttaccacttgaaggtcgtctacaggtgcacatatag
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