Theobroma cacao (cacao): 18610618
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Entry
18610618 CDS
T02994
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18610618
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
18610618
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Gene cluster
GFIT
Motif
Pfam:
RRN3
MiaE
Motif
Other DBs
NCBI-GeneID:
18610618
NCBI-ProteinID:
XP_007046444
UniProt:
A0AB32VHA1
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Position
1:complement(117292..122848)
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AA seq
628 aa
AA seq
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MGLELPKYPEMEEDNFVNFTDSEIVSHVKDALTSVLSGDSNSYNQLVAVMHHSKRLAPDE
VALLETTLKALGGAVSCIDTTLHDSLLSAIFSMSMWNYGPHVADALAELIVSLAISNGKY
LDLCLGMLVSNFTPPPYFLDKLKLPRGLERKGQVLSLVHAAFKKISDYIPLAPLRLSNIV
LQGMPTIYHKDRAIVIYVENMLKLESGEIGELVGSTMLMAVVDQLIELDLEIGWDAILQD
DFSKGIFEMELEDVDEVEESAEQDTGEFRLSRKSLAGNSIAELLDNLLVLTFEHLESCER
AGRLAKVFETLLQSFQITVMSAYKSKFTQFVMFYACALDPDYCGMRFATMLADLFVQDSH
PQPIRMSAVAYLASYLSRAKFLSASRISSMLKRLVDWCLEYGKTPDGDINPNAHRVFYSG
CQAIMYVLCFRMKVFMDVPRLKMQLLMPMEQILKHKLNPLKVCLPSVVEEFLLQSKAACL
FTVSKTFVFDGLLESELSRAFGGLERLDTFFPFDPCLLKRCDSFIRPMFVFWSMVKPTYD
DAYDDDNDDGSSDDELIQDFVNENEDIMDDGVARSFDEQGLDLDEFDCALKKMSITPKNG
FSYKFGGGFQEPTRMPCRIRPSTSPESL
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgggactggaattgccaaaatatccggagatggaggaagacaacttcgtcaatttcacc
gattctgaaatagtttctcatgtgaaggatgctctcacctctgtcctatctggtgatagc
aacagttataaccagcttgttgcggtcatgcaccattccaagcgtcttgctcctgatgag
gtcgccttacttgagactactttaaaggcactaggtggtgcagtatcatgtatagacact
actcttcatgactcccttctttctgctatttttagtatgagcatgtggaactatgggcct
catgttgcagatgcacttgccgaactcattgtatccctcgctatttcaaatggaaaatat
cttgatttatgtctgggtatgcttgtcagcaattttacccctccaccttatttcttagat
aaactaaaactgccacgcggtcttgagaggaagggccaagttctttctctggtgcatgcg
gcctttaaaaagatttctgattatattcctctcgcccctttgagattatcgaacatagtt
ctccaaggaatgccaacaatttatcataaggaccgagctattgtgatttatgtggagaac
atgttaaaattggagagtggtgaaattggagaacttgtaggaagcacaatgcttatggca
gtggtggatcagcttatagaactagatctggagattggatgggatgccattttacaagat
gactttagtaaaggcatatttgagatggagctagaagatgtggatgaagttgaggaaagt
gctgagcaagacactggagagtttcgattaagtcgtaagagtctggctggaaacagcatt
gctgaattgttagataacctactggttttaacctttgaacatcttgaatcctgtgaaaga
gctggccgcttggctaaggtgtttgaaactcttctccagtcttttcagatcactgttatg
agtgcctacaagtcaaaatttactcagtttgtgatgttctatgcttgtgcactagatcct
gactactgtggtatgagatttgccacaatgctggcagatttatttgttcaagactcacat
ccacagccaatcaggatgagtgctgtggcttatcttgctagctatttatctcgagcaaag
tttctgtcggcctctcgtatttctagcatgctaaaaaggttggtggattggtgcttggaa
tatggcaaaacccctgatggtgatataaatccaaatgcacatcgagttttctattctgga
tgtcaggccattatgtatgttctctgctttcgtatgaaagttttcatggatgttccgcgc
ttgaagatgcagctcctcatgccaatggagcaaatcttaaagcataaattgaatcctttg
aaggtatgccttccatctgtagtagaggagtttctactacaatcaaaagcagcttgtctc
tttactgtgtccaaaacgttcgtttttgatggcctgttagagtcagaactttcaagggca
tttggtggcctggaaaggcttgatacattctttccttttgatccatgtttgctgaaaaga
tgtgacagtttcatccgcccaatgtttgtcttctggtcaatggtaaaaccaacgtacgat
gatgcttatgatgacgacaacgatgatggcagcagtgatgatgaattgattcaggatttt
gttaatgagaatgaggatattatggatgatggggttgctaggagctttgatgagcaagga
cttgatcttgatgaatttgactgtgcattgaagaaaatgtcaatcacaccgaagaatggc
tttagttacaagtttggtggtggatttcaagaaccaacaagaatgccttgtagaattagg
ccatctacaagtccagagtccttatga
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