Theobroma cacao (cacao): 18610689
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Entry
18610689 CDS
T02994
Name
(RefSeq) ATP-dependent DNA helicase Q-like 3
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03440
Homologous recombination
tcc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
18610689
03460 Fanconi anemia pathway
18610689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tcc03032
]
18610689
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18610689
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
18610689
DNA replication proteins [BR:
tcc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
18610689
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
18610689
Bloom's syndrome complex (BTR)
18610689
FA (Fanconi anemia) pathway
18610689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
DUF3052
Motif
Other DBs
NCBI-GeneID:
18610689
NCBI-ProteinID:
XP_017982856
UniProt:
A0AB32WYW4
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All DBs
Position
1:462848..468877
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AA seq
728 aa
AA seq
DB search
MKKSPLPVQNLSGKEKQRGCGKEALVKLLRWHFGHPDFRGKQLEAIEAVLSGRDCFCLMP
TGGGKSMCYQIPALAKTGIVLVVSPLIALMENQVMALKEKGIAAEFLSSTQTSQVKNKIH
EDLDSGQPSLRLLYVTPELIATSGFMSKLTKIHGRGLLNLIAVDEAHCISSWGHDFRPSY
SKLSSLRNSLPDVAILALTATAVPKVQKDVIDSLNLQNPLILKSSFNRPNIYYEVRYKDL
LDDGYADLCNVLKSAGDVCGIVYCLERATCDDLSTHLSRNGISCAAYHAGLNNKSRSSVL
DDWSSSKIQVVVATVAFGMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSRSLLY
YGMDDRKRMEFILSSAESKKLQSSNSQHGFSKKSMSDFNLMVEYCEGSRCRRKKILESFG
EEVSALLCKKSCDACKHPNLITKCLEELASACAVRQRNGFSRILMSSSTDAIDNAQFSEF
WNHDDEASGSEEDISDSDDGFELAKSISRCKVSKKSGINEKIEFLQRAEENYYQNKAPDK
QTNKPDKNAISEMLRESSKQRLLDALKQAHQRLGDLKVDFEASSTFLESECFKKYGKSGK
SFYYSQVASTVRWLSTTSSVEITNRVATGTTSHENSTRKENPPLTASTKFVQREKEIIGE
QHCGNIELETSASALPLQNPSPSTKLPTIPSFSQFVNNRKSKETQPNASEKHSPKSLETN
MKKRMRLQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtcgccattgccggtgcaaaaccttagcggcaaagagaagcagcggggatgt
ggaaaagaagctttggttaagctcttgagatggcatttcggtcatccagatttcagaggc
aaacagttggaagccatcgaagccgttttatcaggaagagattgtttttgtctgatgccg
actggaggaggaaaatcaatgtgttatcaaatccctgcgctggctaaaacgggaattgtg
ctcgtcgtttctccattgatagctttgatggaaaaccaagtaatggcattgaaagagaaa
ggaattgctgctgaatttctctcctcaactcaaacgtcacaggtgaagaacaagattcat
gaagatcttgattctggacaaccatctttacgcttgctttatgtgacacccgagttaatt
gccacttcagggtttatgtcaaagctgacaaagattcatggcagaggattgttaaatctc
attgctgtagacgaggcacattgcatctcatcttggggccacgatttcaggcctagctat
tctaagctttcatctttgaggaacagtctaccagatgtagcaatattggctttgactgcc
actgctgttcctaaagtccagaaggatgtgatagactccttaaacttgcaaaacccttta
atccttaaatcatctttcaaccgtccaaatatatattatgaagttcgatacaaagatctt
ttggatgatggttatgctgacttgtgtaatgtgctcaaatctgctggggatgtctgtgga
attgtttactgccttgaacgggcaacttgtgatgacttgtccacccatctctccagaaat
ggaatttcctgtgctgcctatcatgcagggctaaataataaatcgcggagctctgtttta
gatgattggagttcttccaagatacaggttgttgtggccacagtagcttttggaatgggc
atagacagaaaggatgtcagaatagtttgccattttaatatcccgaagtcaatggaagcc
ttctatcaagagtcgggtagagctggtcgtgaccaattgccttcaagaagcttgttatac
tatggaatggatgatcgaaaaaggatggaatttattcttagcagtgctgagagcaagaaa
ctgcaatcatcaaattcacaacatgggttttcaaaaaagtcaatgtctgattttaatctg
atggttgaatattgtgaaggttccagatgtcgtaggaaaaagattcttgagagctttggg
gaagaggtatctgcattgctatgtaaaaaatcatgtgatgcctgcaaacatccaaacctt
atcaccaagtgtctggaagagctcgcatctgcttgtgctgttcggcagagaaatggtttt
tcaagaatcttaatgagcagctccacagatgccattgataatgcccagttctcagaattc
tggaatcatgatgatgaagcaagtggctctgaggaggatatatctgattctgacgatgga
tttgagcttgcaaagagcatatccagatgcaaagtttcgaaaaaatctgggataaatgag
aagattgagttcttgcagcgtgcagaagagaactattatcagaacaaagcccctgataaa
cagaccaataaacctgacaaaaatgccatatccgaaatgctgagagaatcaagcaagcaa
agattgttagatgccctgaagcaggcccatcagcggcttggtgacttgaaggtcgatttt
gaagcatcttcaactttccttgaaagtgagtgctttaagaaatatgggaagagcgggaaa
tcattttattattctcaagtggcaagcacggtaaggtggctatcaaccacaagctctgtc
gagataacaaatcgggttgctaccggtaccacttcccatgagaacagtacgcgtaaggaa
aatccacctttaacagcgtcaaccaagtttgttcaaagagaaaaagaaattattggtgaa
caacattgtggcaacattgagttagagacttcagcaagtgctttgcctctgcaaaatcct
tcgccaagtactaagctgcccacaattccatctttctcacagtttgtcaacaacagaaag
tcaaaagaaactcaaccaaatgcatcagagaagcattcaccaaaaagcctagagacaaat
atgaagaagagaatgaggttgcagtag
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