Theobroma cacao (cacao): 18610956
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Entry
18610956 CDS
T02994
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18610956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18610956
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
18610956
Prokaryotic type
Archaeal type
TFB
18610956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
18610956
NCBI-ProteinID:
XP_007046979
UniProt:
A0AB32VLR0
LinkDB
All DBs
Position
1:complement(1714896..1718331)
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AA seq
526 aa
AA seq
DB search
MKCPYCSAAQGRCATTTTGRSITECTSCGRVVEERQFQNHHLFHVRAQDTPLCLVTSEIP
ALASAFQVDEDDPFEPTGFITAFSTWSLEPSPLFLRSSLSFSGHLAELERTLELSSSSAP
SSTSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALATA
ALVQAIREAQEPRTLQEISIAANVPQKEIGKYIKILGEALQLSQPINSNSISVHMPRFCT
LLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTGL
TEVTLRKVYKELLENWDDLLPSNYTPAVPPEKAFPTTTIATGRSSGPRVDPIDLSSVERD
KQQDSKPNKQIETLEPGLQARGKDDAESNGNPSGTHTAMLNRPPHYRQPWLQFGPPGVWT
AGDRNQTIVRADINEAQTSCPELEQKGDKPKIDSKGATSSLRPSQFSTTPASNVSTITWP
FRSPPSSGPTPNMPIVHPPKLPPGYAELKGPGSQNGSKNTNQGGDS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccatattgctcggcggcgcaaggtcggtgcgccacgacgaccacgggccgg
tctataacagagtgcacctcgtgcggtcgagtcgtggaagaacgccaattccagaaccac
cacctcttccacgtgcgtgctcaagacacccctctctgccttgtcacctccgaaatcccc
gctctcgcttccgccttccaagtcgacgaagacgacccgtttgagcccacggggtttatc
acggcgttttccacatggtccctcgagcccagcccactcttcctccgctcctctctctcc
ttctccggccacctcgccgagctcgaacggactctggagctttcttcgtcttcggcgcca
tcgtctacgtcatcgtcgacggttgtggtggataatttgagggcgtatatgcagattatt
gacgtggcgtcgattttggggttggattgcgacatatcggatcacgcgtttcagttgttt
agggattgttgttcggccacttgtttgaggaaccggagtgttgaggcgcttgctactgct
gctcttgttcaggccattagggaagctcaagagccccgaaccctccaggaaatctccatt
gctgccaatgtaccgcagaaagagataggcaagtacataaagatattgggagaagctcta
caactaagtcagcctatcaatagtaattcaatatcagtccatatgccaagattttgcact
ctccttcagcttaacaaatctgcacaggagctggcaactcatattggagaagttgttatc
aacaaatgcttctgcactcggaggaatccaatcagcatctctgcagctgctatatatctg
gcatgccaattagaagacaaacgcaagacacaggctgagatttgtaaggtgacaggtctc
acggaggtcacccttcgaaaagtctacaaggaactattagaaaattgggatgatctactt
ccatcaaattatactccggctgtccctccagagaaagcatttcccacaactacaattgcc
acaggccgatcttcagggcctagagttgatccaattgacctttcttcagtggagagagat
aagcagcaagactccaaaccaaataagcagattgaaacgttggaaccaggccttcaagct
agaggcaaggatgatgcagaaagcaacggcaacccttctggaacccatactgctatgttg
aaccggccaccacattacaggcagccctggcttcagtttggtccacctggtgtttggaca
gcaggagatagaaaccaaaccatcgttcgagcagacatcaacgaggcacaaacgagctgt
ccagagttggagcaaaagggggataagcccaagatcgatagcaagggtgctactagttct
ctaaggccaagccagttctcaaccactccagcttcaaatgtgagtacaatcacttggcca
tttcgttcaccaccctcatcagggcctactccgaacatgccaattgtgcatccgccaaag
ttgccaccaggttatgcagaactcaaaggaccggggagccaaaatggaagtaaaaatacc
aatcagggtggagactcataa
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