KEGG   Theobroma cacao (cacao): 18610963
Entry
18610963          CDS       T02994                                 
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18610963
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcc03041]
    18610963
Spliceosome [BR:tcc03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    18610963
 Complex B
    18610963
 Complex C
   U2 SnRNP specific factors
    18610963
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 18610963
NCBI-ProteinID: XP_007046986
UniProt: A0AB32VKX7
LinkDB
Position
1:complement(1742614..1746387)
AA seq 368 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPESGNSRGFGFISYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTKGERHGTPAERVLAASNPNAQKSRPHTLFASAPPSLPSGPQANGAI
GAPVPPRPFANGTVPPGPMPVLRPPPPQSVPFPPMQVPGQAPWQGQPQQPGQPIPPPVMP
QHMQFRPPPPNMPPPPPPQAASALSRPPPPMGMGAPQWPPPPPPQQMVGRPPMPQMSMPP
PPPPPSTS
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgactacgcgaatcgctccaggagttggagcgaacttgcttggtcaacattccgccgag
aggaaccaagacgccactgcttatgtcggcaatctcgatcctcaggtatctgaggagcta
ctatgggagttatttgttcaagctggtcccgttgttaatgtttacgtgccaaaagatagg
gtgacaaacctgcatcaaggatatggatttgtagaattccgaagcgaagaagatgctgac
tatgcgattaaggttctcaacatgattaagctttatggaaagccaatacgtgtaaataag
gcgtctcaagataaaaagagcttggatgttggtgcaaacctttttatagggaaccttgac
cccgatgtggatgagaaacttttgtatgatactttcagtgcatttggagttattgtaaca
aatcccaagataatgagagatccagagtcaggaaattcacgtggttttggatttatcagc
tatgattcatttgaggcatctgatgcagctattgaggcaatgaatggccaatacctctgt
aaccgccaaataacagtttcttatgcatataagaaagacaccaaaggggagcgccatggc
accccagcagagagggttttggctgcaagcaacccaaatgcccagaagagcaggccccat
actttgtttgcaagtgcacctccatcactcccctctggtccccaggccaatggtgctata
ggtgcaccagtgcctccacgaccttttgcaaacggtactgttcctcctggcccgatgcca
gtacttcgtcctccacccccacaaagtgtacccttcccaccaatgcaggttcctggacaa
gcaccttggcagggtcagccacagcaaccaggtcaaccaattccacctccagtcatgcct
cagcatatgcagttcagacctcctcctccaaatatgccaccgccaccgcctccacaggca
gcgtctgctctttcaagacctcccccaccaatgggaatgggagcaccacaatggccacca
ccgccaccaccacagcaaatggttggaaggccccccatgccacaaatgtcaatgccaccc
cctcccccacctccatctacaagttaa

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