Theobroma cacao (cacao): 18611075
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Entry
18611075 CDS
T02994
Name
(RefSeq) upstream activation factor subunit spp27
KO
K15223
upstream activation factor subunit UAF30
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18611075
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
18611075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DEK_C
CDC45
Prothymosin
CCD97-like_C
Sporozoite_P67
Motif
Other DBs
NCBI-GeneID:
18611075
NCBI-ProteinID:
XP_007047160
UniProt:
A0AB32VMV1
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All DBs
Position
1:2325455..2329543
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AA seq
322 aa
AA seq
DB search
MVLDSELIARLREFLKESDLNTTTTAIVRRRLEEDFRIDLSEKKKFIREQVDLYLQSQFE
NAEEQEQEQEDENNEEDDQTAKIKSEETDGSDSNEEEEESERARNKRASAKKGSKRVNNE
VKRRGGGFNKVCSLSPQLQELVGVPALARTEVVKQIWAYIREKNLQDPVNKKNIICDEPL
LALFGVRSIDMFQMNKALSKHIWPLDSDEVVSVKSTEREKQRKHVREEDPDEPKRKEKRQ
KGFLAPLQLSDALVKFLGTGESVLTRADVIKRMWDYIKENNLQDPSDKRKVICDEKLKEL
FEVETFTGFTVSKLLAAHFLKT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggactccgagctaatcgcccggctccgggagttcttgaaagagtcggacctg
aacacgacgacgacagcaatcgtacggcggagattggaggaggatttcaggattgattta
tcggagaaaaagaagtttattagggagcaagtcgatttatatctccaaagccagttcgaa
aatgccgaagaacaagaacaagaacaagaggatgaaaataacgaagaagatgaccagacg
gcgaagattaaatcagaggaaaccgacggctctgattcgaacgaggaagaggaggagagt
gaaagagcaaggaataaaagggcttccgcgaagaaagggtcaaaaagagtcaataatgaa
gttaagagaagaggaggtggttttaacaaagtatgtagcctttcaccacaacttcaagaa
cttgtaggagtgcctgcattggcgaggactgaggtagtcaagcaaatatgggcttatatt
agagagaaaaatttgcaagacccagttaacaagaaaaatataatttgtgatgagccattg
ctagcactttttggtgttcgttccattgacatgtttcaaatgaacaaagccctgtcaaag
catatctggcccttggattcagatgaagttgtttcagtcaagtcaacagagagggaaaag
caacgtaagcacgtgagagaagaagatccagatgagccaaaaaggaaggaaaagcggcag
aagggatttcttgctcctcttcaactttcggatgctctggtgaagttccttggtactgga
gaaagtgtgctaacgcgggctgatgtaataaagagaatgtgggattatataaaagaaaac
aacctccaggatccatctgacaagagaaaagtaatatgtgatgaaaagctgaaagaactc
ttcgaagttgaaaccttcactggcttcaccgtatcaaagctcttggcggctcattttctt
aagacctga
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