Theobroma cacao (cacao): 18611133
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Entry
18611133 CDS
T02994
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18611133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18611133
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18611133
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18611133
NCBI-ProteinID:
XP_007047268
UniProt:
A0AB32VNH5
A0A061DGF8
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Position
1:complement(2693692..2697924)
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AA seq
357 aa
AA seq
DB search
MDRKLVVLGIPWEVDTEGLRKYMSKFGDLEDCIVMKERSTGRSRGFGYVTFASADDAKNV
LSIEHFLGERMLEVKIATPKEEMRAPAKKVTRIFVARIPPSVDESTFRSHFEEYGEITDL
YMPKDQASKAHRGIGFITFASADSVENLMTDTHELGGSTVVVDRATPKEDDFKPIGRMSQ
GGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRGESTRGMGKKIFVGRLPQEANAEDLR
QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPV
DDAGPSFMMNPAGPYRGFGGPMRPFGRMYGGLHFDDQWGYAIGSARPSRAEWRYRPY
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaccgaaagcttgtggttttgggaataccgtgggaggtggatactgaaggtttgagg
aaatatatgagtaaatttggtgatttggaggattgtattgtcatgaaggagcgctcaacg
ggccgatctcgtggttttggatatgtaacatttgcatccgctgatgatgctaagaatgtg
ctatcaattgagcattttcttggtgagagaatgctggaagttaaaatagctactccaaag
gaggagatgagagcacctgcaaagaaagtaaccaggatatttgtagccaggattccacca
tcagtggacgaatcaacgtttcggagccatttcgaggagtatggtgagataacggattta
tacatgccgaaggatcaagcgtccaaagctcaccgtggaattggttttatcacttttgct
agtgcagattctgtggagaatctgatgactgatactcatgaactgggaggttctacggta
gtagttgatcgagcaacaccgaaggaagatgactttaaaccaataggcagaatgtcacaa
ggtggatatggtgcatacaatgcatacatttctgctgcaactagatatgctgcacttggt
gctcctaccttgtatgaccatcctggccctgtgtatggaagaggagaatctactcgaggg
atgggcaaaaagatatttgttggcaggctccctcaggaggctaatgctgaagatcttcgc
cagtattttggtagatttgggcgtatactagatgtttatgttcctaaggaccccaagaga
tctggccacagaggttttggttttgtcacttttgctgaagatggagttgcagaccgagta
tctcgtaggtctcatgagatttgtggacaacaggtggcaatagattctgcaacacctgtt
gatgatgctggccctagtttcatgatgaatcctgctggaccgtatagaggttttggtggt
ccaatgcgcccttttggtaggatgtatggaggcctgcattttgatgatcagtggggttat
gcaattgggagtgcaaggccatcgagagcagagtggaggtataggccatactaa
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