Theobroma cacao (cacao): 18611331
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Entry
18611331 CDS
T02994
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18611331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18611331
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18611331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_Nup35
Nup35_RRM_2
PHM7_cyt
DUF1866
RRM_3
RRM_PARP14_1
DUF4283
Motif
Other DBs
NCBI-GeneID:
18611331
NCBI-ProteinID:
XP_017972310
UniProt:
A0AB32W086
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Position
1:3760078..3761075
Genome browser
AA seq
256 aa
AA seq
DB search
MEFENPRLFIGGISEEVKEETLRQHFSKYGEVTQSLKISKKGIGFVAFADPSMAKTALQE
EEHIILGRKVDVKPAKPRVQTKDTRTKIFVGGLPPTITLPEFRNYFESYGTITDAVVIYD
KKSHRFRGFGFVTFDSEEAAENVLRKSFHELNNKMVEVKKAEPRDKKTSNSDPHENGLVP
LGLPYGIYNVNTQPNYFPAESYLCMWNWSPHGGQPPFGSFHVVYFNFNSWTQVGQTGKRA
NCFRVFSCDYIFGFVT
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgagaacccaagattgtttataggagggatttcagaagaagttaaggaagaa
acactaagacaacactttagcaagtatggggaggtgacacagtctcttaaaatttccaag
aaaggaattgggtttgttgcttttgctgatccttcgatggctaaaaccgcccttcaagaa
gaagagcacattattctcggtagaaaggtggacgtcaaaccagcaaaaccaagagtgcaa
accaaagatacgaggactaagatttttgtgggaggtttgcctcctaccataacactgcca
gaattcagaaactatttcgagagttatgggacaatcactgatgcagtggtgatatacgac
aaaaagagtcataggtttagagggttcggattcgttacttttgattcagaggaagccgcg
gagaatgttttgcgcaagagtttccacgaattgaataataagatggtggaagtgaagaaa
gcggaaccaagggataagaagacaagcaattctgaccctcacgaaaatggtttagttcca
cttgggcttccttatggcatttataatgttaatactcagcctaattattttcctgctgaa
agttatctttgtatgtggaattggtccccacatggcggacaacctcctttcggaagcttt
catgttgtttattttaactttaactcctggacgcaagttggacaaacaggtaaaagagct
aattgttttcgtgtttttagctgtgattatatctttggtttcgtaacttaa
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