Theobroma cacao (cacao): 18611336
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Entry
18611336 CDS
T02994
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18611336
Enzymes [BR:
tcc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
18611336
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
Pre-60S particles
Helicases
18611336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KRAP_IP3R_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
18611336
NCBI-ProteinID:
XP_007047608
UniProt:
A0AB32VJQ9
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All DBs
Position
1:3786386..3791509
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AA seq
618 aa
AA seq
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MAKNNKQKPPQDPKPNQEEEEQKQHEKDKEEEAEEQEEKSFEELGLDHRLIRALLKKGVD
KPFPIQRVAIPLVLQGKDVVAQARTGTGKTFAYLLPLLHKLFPSDSGSKARLAPAGFILV
PSRELCQQVYKEAVSLIELCRVQLKIVQLTSGMPTSDLRAALAGPPDVLVTTPKCIRDCL
SAGLLQLTSISESLETLVLDEADLLLQFGFGDDLKALTPVIPRRCQCLLMSATSSPDVDQ
LKKLILHNPFVLTLSEVEDVKDEVISKNVQQFWISCSASDKLLYILALLKLELVLKKVLI
FTNTIDAGFRLKLFFEKFGIKSAILNAELPHNSRIHILEEFNAGLFDYLIATDDSQTKEK
EQANGDKHVASRKSRKHLKPKLDSEFGVVRGIDFKNVHTVINFDMPSSASGYVHRIGRTG
RAYSAGASVSLVSPDEMEIFDELKSLLGDEENDDTNIIAPFLLLTKDAVESLRYRAEDVA
RSVTRIAVRESRAQDLRNEILNSEKLKAHFEVNPRDLDLLKHDKVLSKDPPAPHLRDVPD
YLLDQKTRDASKMVKLARAAMGDNKSARRQGSKRKFRKSRDPLKTFSAEAPKRGRKDGMK
GEGKGTDFTHHRKKQKSV
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataacaaacaaaaacctcctcaagaccccaaacccaaccaagaagaagaa
gagcaaaaacaacatgaaaaagacaaggaagaagaagcagaagagcaagaagagaaaagc
ttcgaagaattaggcctcgaccatcgattaatccgcgctcttcttaagaaaggggtcgac
aagccttttccgatacaacgtgttgcaatccctcttgttctgcaaggcaaagacgtggta
gctcaagcccgaacaggtactggcaaaacctttgcctatcttctccctttgcttcacaag
ctgttcccttcggattccggttccaaggctcggcttgctccagccgggttcattctcgtc
ccttcacgtgaattatgtcaacaggtttataaagaagctgtttcattgattgagttatgt
agagttcaattgaaaatagtgcagttgactagcggcatgccaacttctgatttgcgagct
gcattggcagggcctccggatgttttggtaactacaccaaagtgcataagggattgcttg
tctgctggattacttcagctgacttccatcagtgaatcacttgaaactcttgtcctagat
gaggcagatcttttattgcaatttggctttggagatgatctgaaagctcttacacctgtc
attcctagacgttgtcaatgccttcttatgtctgcaacctcaagccctgatgttgaccaa
ctgaagaagctgattttgcacaatccatttgttttgacattgtcagaggtagaagatgtc
aaggatgaggttatttcaaaaaatgttcaacaattttggatttcgtgcagtgcgagtgac
aagttactttatattcttgctctcctaaagttagagttggtgctgaagaaagttttgatt
tttactaatactattgatgctggtttcagattgaaactattctttgaaaagtttggaatc
aagtctgctatcttgaatgctgagttgccccataactctcgtatccatatcctggaggaa
ttcaatgctgggctttttgattatttgattgcgactgatgacagccaaacaaaagagaag
gaacaagccaatggggacaaacatgtggcctcaaggaagtctagaaagcatcttaagcca
aaactagactctgagtttggtgttgtgaggggaattgacttcaaaaatgtgcacacggtt
ataaattttgatatgccttcaagtgcttcaggatatgttcatcgtattggacgcactgga
agagcatacagtgccggtgcttctgtatctcttgtttctccagatgagatggaaattttt
gatgaacttaaatccttattgggtgatgaagaaaatgatgacacaaatattattgcgcca
tttttattgttgaccaaggatgcggtggagtctttacgatatagggctgaggatgtggca
aggagtgtgacaagaattgctgttagagaatcacgagctcaggatttaaggaatgaaatt
ctcaactccgaaaagttgaaggctcattttgaagtaaatccaagagacctagatttattg
aaacatgacaaggttctgagcaaggacccccctgctcctcatcttcgtgatgtgcctgac
tatctattagaccaaaagacacgtgatgccagcaaaatggtcaagcttgctagagctgca
atgggagataataaatctgctcgtcgccagggatccaagagaaaattcagaaaaagcaga
gatcctctcaagactttctctgctgaggcacccaagagaggtcgcaaagatgggatgaag
ggtgagggaaaaggcaccgattttacccatcaccgcaaaaagcaaaaatctgtctga
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