Theobroma cacao (cacao): 18611356
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Entry
18611356 CDS
T02994
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
18611356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tcc04121
]
18611356
03400 DNA repair and recombination proteins [BR:
tcc03400
]
18611356
Enzymes [BR:
tcc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
18611356
Ubiquitin system [BR:
tcc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
18611356
DNA repair and recombination proteins [BR:
tcc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
18611356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_C
FANCL_d3
FANCL_d2
SLX1_C
zf-rbx1
zf-HC5HC2H
zf-HC5HC2H_2
zf-RING-like
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
18611356
NCBI-ProteinID:
XP_007047637
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Position
1:3920649..3925035
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AA seq
292 aa
AA seq
DB search
MEVNEQARCRELAKSSSFYRTVYSEVEEVGWEHLVRLGGDLTFLSFRVLDKKGRVHIMEI
QLDKAYPRVPPMVSADVPYIFNLKWSMNSRLKNLVQQFQEHLKKLQGFWSTLDEIDRSLW
VVDSKQASLAMSCRQIHVGNDCLIMLCININDPRSLPECRFMGSGTIVNSLRKTWKRNGN
RWMSNKPFTENIECLLKTQLPRPPDKEENNLLVECGICYAQYLPIGDELVPKSGSGTDYT
CENNNCSKAFHSMCLVDWLRSITTTRQSFNVLFGNCPYCSEPVAVKTNTTKN
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaatgaacaggctagatgcagagagttggctaagtcgtcctcattttaccgc
acagtttactcagaggtagaagaggttggatgggagcatttggtgagattgggcggagat
ctaactttccttagctttcgtgttttagataagaagggaagagtgcatatcatggaaatt
cagttggataaagcctatcctagagttccaccaatggtttcagcggatgtaccctatatc
ttcaatttaaaatggtcaatgaactcaagattgaaaaacttggtgcaacaatttcaggag
catctgaagaagcttcaaggattctggtctactttggatgagattgacaggtctctatgg
gttgttgattcaaagcaggcatctcttgccatgtcttgtcgtcaaattcacgtaggaaat
gattgcctcatcatgttgtgcattaatatcaatgaccctagatcattaccagagtgtcgt
tttatgggttcaggtactattgtgaactccttgagaaagacatggaaaagaaatggcaat
agatggatgagtaataaaccctttacagagaatattgagtgtcttctgaagacccaactg
ccaaggccccctgacaaagaggagaacaatcttctagttgaatgtggaatctgttatgct
caatatctccccattggtgatgagcttgtacctaaaagtggaagtggaactgattatact
tgtgaaaataacaattgcagtaaggcattccacagcatgtgcttagtggactggttgcgt
tccatcacaacgacaaggcagtcattcaatgttctgtttgggaattgtccgtactgttca
gagccagttgctgtcaagactaatacaacaaagaattag
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