Theobroma cacao (cacao): 18611426
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Entry
18611426 CDS
T02994
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
18611426
Enzymes [BR:
tcc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
18611426
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Y_Y_Y
Ig_DR_A0283-like
CdiI_ImmP
SpaA
Motif
Other DBs
NCBI-GeneID:
18611426
NCBI-ProteinID:
XP_017970644
UniProt:
A0AB32VXI0
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Position
1:4356923..4361979
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AA seq
677 aa
AA seq
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MEKVVNRSHLRQLVFWLLTIIELLLLLSASSEQLSARKLLRDDTTDPLQVQLETSDDNRV
VIDNGLVQVTIGNPNGYLIGLKYKGFDNVLESRNKDQNKGYWDIVWDDNAIDKIETEQFK
VITQTDDLVELSFSKTWNYTTDYRKAVPLNIDKRYIVRRGVSGVYMYGIFERLAEFPAAQ
MYQIRIAFKLQEDKFRFMALSDTRQRVMPMGRDRNSDRSQTLAFKEAVLLTNPTDPRLKG
EVDDKYQYSCENKDNKLHGWIAEPDDNPAVGFWVITPSNEFRTGGPHHQDLTSHAGPTAL
SMFVSTHYAGKDIETSYNEGEPWKKVFGPVLIYLNSASKDARKTLWEDAKRQLNQEIESW
PYNFTGSEDFPNADGRGKVSGQLLVRDRYMDNELMQAQSAFVGLAPPGEAGSWQTEGKGY
QFWTQTDENGRFKIENVRPGEYNLYAWVPGFIGNYKSDLNITIEPGKDIKLGTLIYDPPR
NGPTLWEIGIPDRTAAEFYVPDPYPTLMNSICIDDVDRYRQYGLWERYSDIYRHGDLVYT
VGVSNYSRDWFYAHVTRDGGNSTKRPTTWQIKYNLEDVSETGNYTLQLALASASYAEVQV
RFNYSDSDRPYFTTRLIGSDNAVARHGIHGLYRLYSIIVPGNQFQKGENKIFLSQTRSTG
AFDSVMYDYIRLEGPTS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtggtgaacagaagccacttgagacagcttgttttctggctactaacgatc
attgagttattactccttctatctgcttcttctgaacaactttcagccagaaaactccta
agagatgacaccactgaccctcttcaagtccagctggaaacaagtgatgataacagagtg
gttattgataatggtcttgttcaagtcactatcggaaatccaaatggttatctgatagga
ttaaaatataagggatttgataatgtgcttgaaagtagaaacaaggaccaaaataaaggg
tactgggacattgtctgggatgacaatgcaattgacaaaatagaaacagaacaattcaag
gtcataacacaaactgacgatttagtggagctttccttcagcaaaacttggaattataca
acagactatcgcaaggcagttcccttaaacatagacaaaaggtacatagtccgccgaggc
gtttccggggtctacatgtacggtatcttcgagcgcctggccgaatttccagctgctcaa
atgtaccaaatacggattgctttcaagctccaggaagacaagtttcggttcatggcgtta
tcagacacaagacaaagggtcatgcccatgggacgagatcgaaactctgatcgcagtcag
actcttgccttcaaagaagctgttctattgaccaatccaaccgatccaagacttaaagga
gaggtcgatgacaagtaccaatattcttgtgaaaacaaagataacaagcttcatgggtgg
atagccgaacccgacgataatccagccgtgggtttctgggtaatcaccccgagcaatgag
ttccgtactggtggccctcaccatcaggacctcacttctcatgctggtcccaccgctctc
tccatgtttgttagtacgcattatgccggaaaggacatagaaacgtcttataacgaagga
gagccttggaaaaaggtctttggtcctgttctaatctatcttaattctgcttccaaagat
gctcgcaagacactctgggaagacgctaaacgacagttgaatcaagaaattgaaagctgg
ccgtacaatttcactggatcagaagattttcctaatgctgatggacgaggaaaagttagt
ggtcaattactagtgcgagaccgatacatggataatgaattgatgcaggcgcaatctgcc
tttgtggggttggcaccacctggtgaggcaggatcatggcaaacagaaggaaagggctat
caattctggactcaaaccgacgagaatggccgtttcaaaatagaaaatgttcgaccaggg
gagtataatttgtatgcatgggtccctggtttcattggaaactacaaatcagatctcaac
attactatcgaaccaggaaaagacatcaagttgggtactcttatatatgatcctccaaga
aatggtccgacattgtgggaaatcgggattcctgacaggacagctgccgagttctacgta
ccggatccatacccaacacttatgaactcaatatgcatcgatgacgtagacagatataga
caatacggattgtgggaacgctactcagatatttatcgtcacggtgatcttgtctacact
gtgggtgttagtaattattctcgggattggttctatgctcatgttaccagggatggaggg
aacagtacaaagcggccaaccacatggcagattaagtacaatctcgaagatgtgagcgag
acaggaaattacactctccaattggccttggcatcagcttcttatgctgaagtacaggtt
cgattcaactattcagattctgaccgaccttattttacaacgaggctaataggcagcgat
aatgccgtagcaaggcatggaattcatggattatacagattgtatagtattattgtacct
ggtaatcaatttcagaaaggggaaaataaaatatttctcagtcagacaagaagcacgggc
gcattcgactcagttatgtatgactacattcgattagaaggaccaacaagttaa
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