KEGG   Theobroma cacao (cacao): 18611514
Entry
18611514          CDS       T02994                                 
Name
(RefSeq) uncharacterized LOC18611514
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03022  Basal transcription factors
tcc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    18611514
  09124 Replication and repair
   03420 Nucleotide excision repair
    18611514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tcc03021]
    18611514
   03400 DNA repair and recombination proteins [BR:tcc03400]
    18611514
Transcription machinery [BR:tcc03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     18611514
DNA repair and recombination proteins [BR:tcc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     18611514
SSDB
Motif
Pfam: MAT1 PLU-1
Other DBs
NCBI-GeneID: 18611514
NCBI-ProteinID: XP_007047865
UniProt: A0AB32VNE7
LinkDB
Position
1:4990242..4992935
AA seq 191 aa
MVVASSNPHNREMQIRRRINSIFNKREDDFPSLREYNNYLEEVEDMIFNLIEGIDVQAIE
EKISKYQVENAEQIMINQARKAEDLAAAMAASKGLPIQADADGALNQSSQAGFVAGAQGQ
YAPTVPGGQPRPTGMAPQPVPLAGGLDMHGYALDDEEMMKLRAERGGRAGGWSIELSKRR
ALEEAFASIWI
NT seq 576 nt   +upstreamnt  +downstreamnt
atggtggttgctagttccaatcctcacaacagggagatgcaaatccgtagaagaataaac
agcatattcaataaaagagaagatgattttccatccctgagagaatacaataattatttg
gaagaagtggaagatatgatttttaatttgattgaaggaatagatgttcaagctattgaa
gaaaaaattagtaagtatcaggtagaaaatgctgagcagataatgatcaatcaagctcgg
aaggctgaagatttagctgcagctatggcagcaagcaagggacttcccatacaggctgat
gctgatggggccttaaaccagagctctcaagcagggtttgttgctggtgcccaaggtcaa
tatgcacctacggttcctggagggcagccacgaccaacaggcatggctccacaacctgtg
ccacttgcaggtgggctggacatgcatggttatgctctggatgatgaggaaatgatgaag
cttcgagcagaaagaggtggacgagcgggagggtggagtatagagttgagcaagaggagg
gccctcgaagaagcctttgcaagcatttggatttga

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