Theobroma cacao (cacao): 18611723
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Entry
18611723 CDS
T02994
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tcc03041
]
18611723
Spliceosome [BR:
tcc03041
]
Common components
Common spliceosomal components
General mRNP proteins
18611723
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
Motif
Other DBs
NCBI-GeneID:
18611723
NCBI-ProteinID:
XP_007048198
UniProt:
A0AB32VNV8
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All DBs
Position
1:6414386..6421213
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AA seq
568 aa
AA seq
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MDFDEYEYLEKTVEEQEDPKKKKKDGGGSGEKSERSYRKRDGEREEDEDEGKSSSKKSRG
GRDEDDEERRDRDKDRHRSSRDRERERERERDRDRDLERRSSREREKERERERRDRDKEK
ERDRERREREKERERREREKEKERERERRERSSSRSRRHESDREREREREVVDIRDSRRF
KEKKEVVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKG
VGYIEFYDVMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTSGAGAGGVAGPYGAVD
RKLYVGNLHFNMTEMQLRQIFEPFGPVELVQLPLDLETGQCKGFGFVQFAQLEHAKAAQS
ALNGKLEIAGRTIKVSSVTDHVGTQDTAAKSADFDDDEGGGLALNAQSRALLMQKLDRSG
IATSITGSLGVPLLNGSAPNLQAVTLPVNGQAAYPAPIVPPIMSTTAVDPTGQPSECLLL
KNMFDPATEMEPDFDLEIKEDVEEECSKYGRVKHIHVDKNSAGCVYLRFDSAEAAGKAQR
AMHMRWFAGRSISALFMQPHEYEARFNG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacgagtacgaatatttggaaaaaaccgtggaggagcaggaagatccgaag
aagaagaagaaagacggaggaggatcaggggaaaagagcgagagaagctacaggaagaga
gatggggagagagaggaagatgaagatgaaggcaagagcagcagcaagaaatcgagaggc
ggccgcgatgaggacgacgaggagaggcgagatcgggataaggatcggcatagaagcagc
cgcgacagagaaagggaaagggagagagagagggacagagatagggatttagagaggagg
agtagtagagagagggaaaaggaaagggagagagagaggagagatagggataaggagaaa
gagagggatagggagaggagagagagggaaaaggaaagagagaggagggaaagggagaaa
gagaaggaaagggagagagagaggagagagagaagcagtagtcggtcgaggagacacgag
agtgatcgcgagcgggagagagaacgcgaagtcgtcgacatcagagatagcaggagattt
aaagagaagaaagaagtagtggagcctgaagctgatcctgagagggaccagagaactgtt
tttgcttaccagatgcctctgaaagcaactgagagagatgtttatgaattcttctcgaag
gcagggaaggtgagggatgtccgtctgatcatggataggaattcaagacgatcaaaggga
gttgggtatattgagttttatgatgtgatgtctgtgccaatggcaatagcattgtctggt
caactgctccttggtcaacctgtgatggttaaaccttcagaggctgaaaagaatcttgtt
cagtcaaatacttctggtgcaggcgcaggtggtgttgctggaccatatggagcggttgat
agaaaattgtatgtggggaacttgcacttcaatatgacagaaatgcagcttagacagata
tttgaaccttttggtcctgtggagcttgtgcaactaccacttgacctagagactgggcag
tgcaaaggttttgggtttgttcagtttgctcaacttgaacatgcaaaagctgctcaaagt
gcattgaatggaaaacttgagattgctggtcgaaccattaaggtttcatctgttacagat
catgttggtacccaagatactgcagcaaaatctgctgactttgatgatgatgagggtggt
gggttggctttaaatgctcaatcaagagcattgcttatgcagaaactggatcgctctggt
attgcgacaagcattacgggctcacttggagtaccccttcttaatgggtcagctccaaat
ctacaggctgttaccttgcctgtcaatggccaagctgcatatccagcaccaattgtacct
cccatcatgtcgactacagccgttgatcctactggacagcccagtgagtgtttgctgttg
aagaatatgtttgatcctgctactgagatggaaccagattttgatttggaaattaaagag
gatgttgaagaagaatgcagcaaatatggccgggtgaagcatatacatgtggacaaaaac
agtgctggttgcgtgtatcttcgatttgactctgcagaagcagcgggcaaagctcaacgt
gcaatgcacatgagatggtttgcaggccgatcaatatcagccttatttatgcaaccacac
gagtacgaagcaaggtttaatggttga
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