Theobroma cacao (cacao): 18611796
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Entry
18611796 CDS
T02994
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
18611796
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tcc03000
]
18611796
03021 Transcription machinery [BR:
tcc03021
]
18611796
Transcription factors [BR:
tcc03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
18611796
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
18611796
RNA polymerase III system
TFIIIB
18611796
RNA polymerase I system
SL1/TIF-1B
18611796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
18611796
NCBI-ProteinID:
XP_007048299
LinkDB
All DBs
Position
1:complement(6875219..6875821)
Genome browser
AA seq
200 aa
AA seq
DB search
MADTGSSESNQVSDPSGRPTPMLQNVVSTVNLNCTLDLKAIALHARNAEYNPRRFAAVVM
RIKEPKTTALIFSSGKIVCTGAKTVQQSQLAARKYARIVEKLGFHVNFRDFKIQNLVASC
NVLVPISLTRLACHHYEHATYEPELFPGLIYRMRRPKITMLIFPSGKLVITGAKERVEID
TAFENIYPVLMSFRINKKDK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacaggatcatcggaaagtaaccaagtttccgatccatccggccgcccaacc
cctatgcttcagaatgtagtttcaactgtgaacctgaactgcaccctggatctaaaggcc
attgcccttcatgctcgcaacgcagaatacaaccccagaaggtttgctgccgtggtaatg
aggatcaaggaacctaaaaccactgcactcatattttcctctggaaagattgtttgcact
ggtgccaaaaccgtgcaacaatcccagttggctgccaggaagtatgctcgaatcgttgaa
aagcttggatttcatgtcaatttcagggatttcaagattcagaatctggttgcttcttgt
aacgttttggtccctatcagtttaacacgtcttgcttgtcatcattatgagcatgcaaca
tatgaaccagagttgtttccaggattaatttatcggatgagacgacccaaaatcacaatg
ttaatttttccatctggaaagcttgttattactggagcaaaggagagggttgaaatagat
acagcttttgagaatatatatcctgttctcatgtctttcaggataaacaagaaagacaag
taa
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