Theobroma cacao (cacao): 18612236
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Entry
18612236 CDS
T02994
Name
(RefSeq) plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tcc03021
]
18612236
Transcription machinery [BR:
tcc03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
18612236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
18612236
NCBI-ProteinID:
XP_007048984
UniProt:
A0AB32VJM6
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Position
1:complement(10640861..10643262)
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AA seq
525 aa
AA seq
DB search
MSCKCGSRSTFRDDVTGNLVCSECYTVLDFDNYDAQIGGINGPQGTNIHIGYAGTGSLFS
YKDKKIFQAKTLIHEYTLNLNMSYSESDVTSMINEITEGQFGGGDWFNVLIGASCYVVMR
RDNRFLPAAEVAEVVGCDVYELGRMIARVVKFLNLTLPEVSIAGLFERELNNSMRLANVD
GEKKERMRKQGIFLVNCSVKWFLTTGRRPLPIVAAVMAFVAELNGVEGLKIEDVAKEVHA
TVATCKLRYKELLEALVKVAQVLPWGKDVTVKNVVKYAPFVIRYMEMKSMEEPGAVERGE
NFDLDDVVSECLRKVAEYGDDKDYIEGDSQYFDGRDRSEFPRIYNDNNIGNLKLSHECLS
MIYTNFLNEVDDDRLEGQSGKVHGRKSRGLELHACKDWWSGKSELSKKLLLKQIMEKEIG
LDAMPPSFIAGCKANERRRKKINAAKVRINKIIDPSNSGSDGSGNFCSSEVVCAGKKRKR
RQASEIDWEDFVIETLLLHQVKEEDIEKGHYKALLGLHVFNSGMK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcaaatgtggaagccgttcgaccttccgcgatgacgtgaccggcaacctcgtc
tgctccgaatgctacaccgtcctcgatttcgacaactacgacgcccaaatcggcggcatc
aacggtccccaaggcaccaacatccacatcggctacgcaggtaccggttctctcttcagt
tacaaagacaagaaaatctttcaagccaaaaccttaatccacgaatacaccttaaatctt
aacatgtcttattccgaatccgacgttacttctatgatcaatgagattactgaagggcaa
ttcggtggaggtgattggtttaatgttttaatcggtgcttcttgttatgttgttatgagg
agagataataggtttttgcccgctgcggaggtcgcggaggttgttggttgtgatgtttat
gaattaggtaggatgattgctcgtgtggttaaatttttgaatttgactttgcctgaggtt
agtatcgcgggtttgtttgaaagagagttgaataattcgatgaggttggcaaatgtggat
ggggagaagaaagagaggatgaggaaacaagggatttttttggtcaactgttcagtcaag
tggtttttgaccacagggaggagaccactgcccatagtggcggcggtgatggcgtttgtg
gcagagttgaatggggtggagggtttgaagattgaggatgtagcgaaggaggttcatgcc
acggtggctacttgtaagttgagatataaggagcttttggaggcacttgtcaaggttgca
caagtattgccatgggggaaagatgtgacagtgaaaaatgtggtcaagtatgcaccattt
gtgattcgatatatggagatgaagtccatggaagaacctggagcagtggaaaggggtgag
aattttgatttggatgatgtggttagtgagtgtttgcgaaaagttgctgaatatggggat
gacaaggattatattgaaggtgattcccaatattttgacggaagggatagaagtgagttt
cctaggatatataatgacaataatataggtaaccttaagctttcacatgaatgcttgtcc
atgatttatacaaattttttgaacgaagttgatgatgataggttggaaggacaaagtgga
aaggttcatgggagaaaaagtagagggcttgaacttcatgcatgtaaggattggtggagt
ggaaaatcggaattaagtaaaaagcttcttcttaagcaaattatggagaaagaaataggt
ttggatgcgatgccaccatcttttattgctggttgcaaggcaaatgagaggagaaggaaa
aagataaatgctgctaaggtgcggatcaataagatcattgatccatccaattctggttca
gatggtagtggcaatttttgctcttcagaagttgtttgtgctgggaaaaagagaaagaga
agacaagccagtgaaattgattgggaagattttgttattgaaaccctcctcctgcatcag
gtgaaagaggaagatattgagaaagggcattataaagcgttgctgggtttgcatgtcttc
aactctgggatgaagtga
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