Theobroma cacao (cacao): 18612243
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Entry
18612243 CDS
T02994
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tcc03009
]
18612243
Ribosome biogenesis [BR:
tcc03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
18612243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
DSE1_N
Beta-prop_HPS5
ASA1
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
18612243
NCBI-ProteinID:
XP_017969804
UniProt:
A0AB32VUZ6
LinkDB
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Position
1:10701959..10706637
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AA seq
523 aa
AA seq
DB search
MGAKEENGDGEMDQTVKKYLRGEAANLEGLQDKKLKGQLAIREELYGKSAKAAAKIEKWL
LPSEGGYLEAEGIEKTWRIKQESIAREVDILSLRNQYDIILPELGPYTLDFTPNGRYMAA
AGRKGHLAVVDMKTLSLIKEIQVRETVRDVVYLHNELFFAAAQKKYPYIYNRDGTELHCL
KEHGAVSRLQFLKNHFLLASINKLGQLHYQDVTMGEMVGNYRTGSGRTDAMQVNPFNGVV
ALGHSSGTVTMWKPTSAAPLVKMLCHPGPVSSLAFHPNGHLMATSGKEKKIKIWDLRKFE
VIQTLSGHAKTLNFSQKGLLAAGTGSFVQILGDFSGSQNYSRYMSHSISKGYQVGKVLFR
PYEDVLGIGHSMGWSSILIPGSGEPNFDSWVANPFETSKQRREKEVHSLLDKLPPETIML
DPTKVGTVRPARKKEKKPTKEEREAEMEAAVEAAKDTDIKKKTKGRNKPSKRAQRRKEII
DRAKRPFLEHRVEEQETFRKKHKTNMETEMPKSLQRFVRQKAT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcaaaagaagagaatggtgatggtgagatggaccaaacggttaagaagtatctt
cgaggagaagctgctaatttggagggattacaagacaaaaaactaaagggtcaacttgct
ataagagaagagttgtatggaaaatctgcgaaagctgctgccaagattgagaaatggctt
ttaccaagtgaaggtggctatttggaggcagaaggtatagagaagacatggaggatcaag
caagaatccattgctcgtgaggttgatatcttaagcttaaggaaccagtatgatattatt
ttaccagaacttggtccatacactctagatttcaccccaaatggtcggtatatggcagct
gctggacgtaagggccatctggctgttgttgatatgaagactttaagcctaataaaagag
attcaggttagagaaacagttcgtgatgtagtgtatttgcataatgaactcttttttgct
gctgctcagaaaaagtacccttatatttataaccgtgatggaactgaactccattgttta
aaggaacatggtgcggtatcaagactccagtttctgaaaaaccacttcctcttggcatca
ataaacaaattagggcagcttcattatcaggatgttacaatgggtgagatggtaggtaat
taccggactggttcaggccgcactgatgctatgcaggtcaatccattcaatggggttgtt
gcactaggtcattcaagtggtacagtaacaatgtggaagcccaccagtgctgctccactt
gtaaagatgctgtgtcatccaggacctgtctcgtcattggcattccatcccaatgggcac
ctcatggctacatctgggaaagaaaaaaaaatcaagatttgggacctgagaaagtttgag
gttatccaaacattgtcaggccatgcaaaaaccttgaatttcagtcagaaaggcttgctt
gctgctggaactggctcatttgtacaaatattaggggatttttctggatctcagaattat
agcagatatatgtctcattctatttcgaaaggttatcaggtaggaaaagttctgtttcgg
ccatatgaagatgttctgggtataggacactccatgggttggtctagtattcttattcct
ggatcaggggaaccaaactttgattcctgggtggcaaacccatttgaaacatctaaacag
aggagagagaaagaagtgcactccctgcttgacaagctgccccctgaaacaattatgttg
gacccaacaaaggtgggtacagtgagaccagcgagaaagaaagagaagaagccaacaaag
gaggagagagaagctgaaatggaagctgccgttgaagctgccaaggatactgacattaaa
aagaaaacaaagggaaggaataagccgagtaaaagagcacagaggagaaaggagattata
gatagagccaagaggccatttttggagcaccgggtggaggaacaagaaacgtttagaaag
aagcacaaaactaatatggaaacagaaatgccgaaaagtttgcagcggtttgttcgacag
aaagcaacttaa
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