Theobroma cacao (cacao): 18612364
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Entry
18612364 CDS
T02994
Name
(RefSeq) protein argonaute 16
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18612364
03036 Chromosome and associated proteins [BR:
tcc03036
]
18612364
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
18612364
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
18612364
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
18612364
microRNA pathway
RISC loading complex
18612364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoN
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18612364
NCBI-ProteinID:
XP_007049194
UniProt:
A0AB32VQD9
LinkDB
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Position
1:12116952..12125959
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AA seq
903 aa
AA seq
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MMEKAEGTEKAGKSPSLLPPPPTMPPNVKPESMKPPKYSIVSRRGVGMRGRHISLLTNHF
KVSVNATDAVFYQYTVTISSEDNRAVESKGIGRKLLDKLYQMYSSELAGKRFAYDGEKSL
YTVGPLPQKKFDFTIVLEESFAKREIGSLDGDGSPVGTGKRTKRSFRSKTYKVELRYSAK
IPLKSISLALEGVESDNSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNYVDVGGG
VLGLRGFHSSFRPTQGGLSLNMDVSTTMILKPGPVIDFLKANQNVNDVRKIIWPKAKRML
KNMRIKTRHSNMEFKITGLSEKPCAELYFPMKVKNGNSGEEQTVEITVYEYFTKHCGIEL
RHSAGLPCLDVGKPKRPNYLPLELCSLVSLQRYTKALSLNQRSTLVERSRQKPQDRIRTL
TDAVRSNQYNEDPVLSACGISTGKQLTEVDGRVLEAPRLKVGNHEVCIPRNGRWNFNNKK
LLDPKKIERWIVVNFSACCDISRISRDLISCARNKGIQMERPHTLIEEDPQTVGASPAAR
VEVMFDLIKSKLPGPPDFILCVLPVRKNSDIYGPWKKKCLSDIGIVTQCICPVKVNDQYL
TNVLLKINAKLGGINSLLEVERPSNLPLIKDIPTLILGMDVSHGSPGRSDIPSIAAVVGS
RCWPLISRYRASVRTQSPKLEMIDALYKPLANGNDDGIIRELLLDFFKTSNGCKPKQIIV
FRDGVSESQFNQVLDIELEQIIKAYQHLGESDVPKFTVIVAQKNHHTKLFQANAPENVPP
GTVVDAKIVHPRNYDFYMCAHAGMIGTSRPAHYHVLFDEIGFAPDDLQNLIHSLSYVYQR
STTAISIVAPICYAHLAAHQMGQFLKFEEHSETSSARMTSAGSIPVQELPRLNQKVAGSM
FFC
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaaagcagaaggtactgaaaaagcaggtaaatccccatctctgctcccacca
ccaccaacaatgcctcccaatgtgaagccagagagcatgaagccccccaagtattctatt
gtcagtaggcgtggggttgggatgaggggacgacacatatcattgctcaccaatcacttc
aaagtttctgtcaatgccactgatgcagtattttaccagtatactgttacaatttcttca
gaagataatagagctgttgaaagcaaggggattggtagaaaactacttgataagctttac
caaatgtactcctccgaacttgctgggaaaaggtttgcatatgatggtgagaagagcttg
tacacggtgggtcctttgccacagaagaagtttgactttacaattgtgctagaggagtca
tttgcaaaacgtgaaattgggagtcttgatggtgacgggagccctgttgggactggtaag
cgaacgaagcgttctttcaggtcaaagacttacaaagtagaactaagatattctgctaaa
atacctttgaagtcaatatctcttgccctggaaggagttgagtctgataatagcactcag
gatgcattgagagtgctcgacatcattctgaggcagcaagctgctaaccgggggtgcctt
ttggtgaggcagtccttctttcatgatgattcaaggaattatgttgatgtgggaggaggg
gtattagggctgcggggtttccattccagttttcgtcccactcaggggggcttgtctctg
aatatggatgtatctacaacaatgattctaaagcctggaccagtgatcgattttctaaaa
gccaaccagaatgtaaatgatgttcgtaaaattatttggccgaaggccaaacgaatgttg
aagaatatgaggattaaaacaagacacagtaatatggaatttaaaataactggtctgagt
gagaagccctgtgctgaactatacttcccaatgaaagtgaaaaatggtaactctggtgag
gagcagaccgtcgagatcacagtgtatgagtatttcactaaacactgtggaatagaactt
aggcattctgcaggcttgccttgccttgatgttggtaaaccaaagcggcctaactattta
ccactagagctctgttcacttgtttcacttcagcggtatacaaaagcattatctttgaat
caaagatcaaccctggttgaaagatccaggcaaaagcctcaggatagaatacgaactttg
actgatgctgtgagaagcaaccaatataatgaggatcctgtactttctgcatgtggaatt
tccacaggaaaacaattaacagaagttgatggtcgtgtccttgaggccccaaggttgaag
gttggtaaccatgaggtttgtatcccaagaaacggacgctggaactttaacaacaagaaa
cttctggatccaaaaaaaattgaacgttggattgttgtcaacttctctgcctgctgtgac
attagtcgcatttcaagggatctcatcagttgtgcaagaaacaagggcattcaaatggaa
cgcccacacacactgattgaggaggatccacagacagttggtgccagccctgctgctaga
gtggaagtgatgtttgatctgattaaatcaaagcttcctggcccacctgattttattcta
tgtgtcttgccagtgaggaagaactctgatatttatggaccttggaagaaaaaatgtctt
agtgatattggaattgtcacacaatgcatttgccctgtaaaagttaatgaccaatacctc
acaaatgtactccttaaaatcaatgcaaagcttggaggaatcaattctttgttggaagta
gagcgcccctcaaatcttcctttgataaaagatattcctacattgattttgggaatggat
gtctctcatggctcccctggtcgatcagatatcccatcaatagctgcagttgttggttca
cgttgctggccactgatttcaaggtacagagcatctgtgagaacacaatcaccaaagttg
gagatgattgatgctttatataagccattagcaaatggaaatgatgatggtatcatcagg
gaattactcttagatttctttaaaaccagcaatggttgcaaaccaaaacagattattgtg
ttcagggatggagtaagtgaatctcaatttaaccaagttttagacattgagctggagcaa
atcattaaggcttatcagcatctgggcgagtctgatgttcctaagttcacagtaattgtt
gctcaaaagaatcatcatactaaattattccaagcaaatgcccctgaaaatgttccacca
gggacagttgtggacgctaaaattgtgcatccaagaaactatgatttctacatgtgtgct
catgcagggatgattggaacatctaggccggcacattaccatgtcttgtttgatgagatt
ggctttgctcctgatgatttgcaaaatcttatccactctctgtcatatgtataccaaagg
agcacaactgctatctcaattgtggctcctatttgctatgcccaccttgctgcacatcag
atgggccagtttttgaagtttgaggaacattcagaaacatcttcagcacgcatgacatct
gcgggaagtatccctgttcaagagctccccaggttgaatcagaaagtggcagggtcaatg
ttcttctgttga
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