Theobroma cacao (cacao): 18612405
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Entry
18612405 CDS
T02994
Name
(RefSeq) ribonuclease Z, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tcc03016
]
18612405
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
18612405
Transfer RNA biogenesis [BR:
tcc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
18612405
Prokaryotic type
18612405
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
18612405
NCBI-ProteinID:
XP_007049249
UniProt:
A0AB32VPY7
A0A061DMU1
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All DBs
Position
1:12539392..12543034
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AA seq
353 aa
AA seq
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MQVSLPVSPSKLPSIFPFHHPIPPPHHPHKNLAFQTQASPFDALKTSGYLSTISRAIEEE
EEYRKARATVTRKGIEVEGCFIEGLSIGGHETCVIVPQFKSAFDIGRCPSRAIQQNFVFI
THAHLDHIGGLPIYVASRGLYNLKPPTVFVPPCIKEDVEKLLDIHRTMGQVELNLDLVAL
DVGETYELRNDIVVRPFRTHHVIPSQGYVIYTIRKKLKKQYIHLKGKQIEKLKKSGVEIT
DIILSPEVAFTGDTTAEYMLDPRNADALRAKILITEATFLDEGYSIDHARQHGHTHLFEI
IEHAQWIRNKAVLLTHFSSRYSIEDIRLAVSKLQSKVSAKVVPLTEGFKSMHS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtctctctccccgtttcaccctccaagctcccctcaattttcccattccaccac
cccattcctccccctcaccatccccacaaaaaccttgctttccaaacccaagccagcccc
ttcgacgccctcaaaacctcaggctatttatccacaatcagccgtgctatagaggaagaa
gaagagtaccgcaaagccagagctactgtcaccagaaagggtattgaagtcgaaggctgc
ttcattgaaggactctctattggtggccatgaaacctgtgtcatagttcctcaattcaaa
tctgcttttgatattgggagatgcccctctcgtgctattcagcagaattttgttttcatt
acccatgctcatcttgatcacattggtgggctgccaatatatgtagctagccgtggtttg
tacaacttaaagcctcccacagtatttgtacctccatgtatcaaagaggatgtggagaag
ctgttggatattcacaggacaatgggacaagtggaactcaatcttgatttggtcgcactt
gatgttggtgaaacatacgaattgcgaaatgacattgtcgtccgaccatttagaactcac
catgttataccaagccagggttatgtcatatacactattagaaaaaagctgaagaagcag
tacattcatctgaaagggaaacagattgagaaattgaagaagtctggtgttgagatcaca
gacatcattttgtctccagaggtggcatttacaggggatacaacagcagaatacatgctt
gatccacgaaatgcagatgccttgagggccaaaattcttataactgaggcaactttcctt
gatgaaggctatagcattgatcatgcaagacaacatggtcatactcatttatttgagatc
attgaacatgctcagtggatcaggaacaaggccgtcctattaactcatttctcatcccgt
tatagtatagaggacattcgtctagctgtttcgaagttgcagtctaaagtgtcagcaaag
gtggttcctctaacagagggtttcaaatcaatgcactcatag
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