Theobroma cacao (cacao): 18612416
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Entry
18612416 CDS
T02994
Name
(RefSeq) exopolygalacturonase
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc00040
Pentose and glucuronate interconversions
tcc01100
Metabolic pathways
Module
tcc_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
18612416
Enzymes [BR:
tcc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
18612416
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
18612416
NCBI-ProteinID:
XP_017974683
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Position
1:complement(12741108..12743028)
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AA seq
405 aa
AA seq
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MAVQLNIAVLSILLLLFSTSIPKAQSTVVDVVAKYGAKADEKTDLSTPLLHAWKEACAST
TPSKIVIPKGTYRLSRATLDGPCKSAIELQVSGTIKAPADPSAFKDPNWVVFNHVDHLTI
SGGGVFDGQGAAVWGKNNCAKNKYCAALPINLRFNFVSNAIVQGITTKDSKQFHVNVLGC
KNFTFQHFTVSAPENSINTDGIHIGRSNGVKILDTNIKTGDDCVSLGDGSKNVIVERVTC
GPGHGISVGSLGKFKGEEPVSGIFIRNCTISNTMNGVRVKTWPDSHPGSATDMHFEDIIL
NNVGNPILIDQEYCPWNLCNLKVPSRVKLSNISFKKIWGTSSTQQAVKLVCSRGLPCDRV
ELADIDITYKGPGGPAISQCINVKPRLSGKQNPPACSSPARRTGA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacagttgaatattgcagttctatcaatattattacttttgttcagtacttca
atccctaaagcccaatctaccgttgttgatgtagttgccaagtatggcgcaaaggctgac
gagaagacggatttgagcactcctttgctgcatgcttggaaagaagcatgtgcatcgaca
accccaagtaagattgtaattccgaaagggacgtacagattaagccgagcaaccctggat
ggtccttgcaaatcagctattgaacttcaggttagtggcacaataaaggctccggcagat
cctagcgctttcaaggaccctaattgggttgtcttcaaccacgttgatcatcttacaata
tctggcggtggagtttttgatgggcaaggagccgctgtttggggcaagaacaattgcgct
aagaacaaatattgcgccgcacttcccattaatttaaggttcaatttcgtcagcaacgcc
attgtacaaggcataactaccaaggacagcaaacagttccacgttaatgttttgggatgt
aaaaactttaccttccaacatttcactgtctccgctcccgaaaacagcataaacacggat
ggaatccacattgggcgatccaatggggtcaagattcttgacacaaacattaaaaccggt
gatgattgtgtctccttgggtgatggtagcaagaatgtgatcgtcgagagagtaacctgc
ggaccaggacatggcatcagtgtgggcagtcttggaaagttcaagggtgaagaaccagtg
agtggaatttttatcaggaattgcaccatcagtaatacaatgaatggtgttagggtcaaa
acttggccagactcccatcctggctcagcaacagatatgcattttgaggatattatcttg
aataatgtcggcaatcctatccttattgatcaagaatactgcccatggaacctatgcaat
ttaaaggttccatcgcgtgttaaactcagcaacattagcttcaagaaaatttggggtact
tcttcaactcagcaagctgtcaagcttgtttgcagccgcggtttgccatgcgatcgtgtg
gaactcgccgacattgacatcacctacaaaggacctggaggacctgcaatatcccaatgt
atcaatgtgaaacccagactttctggcaaacagaacccacctgcctgttccagccctgcc
aggcgtaccggtgcttaa
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