Theobroma cacao (cacao): 18612423
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Entry
18612423 CDS
T02994
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18612423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18612423
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
18612423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
18612423
NCBI-ProteinID:
XP_017974657
UniProt:
A0AB32W590
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All DBs
Position
1:complement(12798413..12801464)
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AA seq
478 aa
AA seq
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MSENGKLFIGGISWDTNEERLKEYFSSFGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAE
RVIKEKHNIDGRMVEAKKAVPRDDQNIMGRSTSSIHALPGPGRTRKIFVGGLASTVTESD
FKKYFDQFGNITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLLKNFHELNGKMVEVKRA
VPKELSPGPSRSPLGGYNYGLNRVNSFLNGYTQGYTPSSVGGYGLRMDGRFSPVAGGRSG
FPPFGSGYGMGVNFEPGLNPSFGNTANFSSNISYGRGLGPYYIGNTNRFGSPIGYDASSG
GNSSFFSSVTRNLWGTGGLNYNTNAASSSAYMGSGSGSIGGSAFGSSGISWGSSAISGQG
GGNNVPSNSVNFGYGSGDSSFGLGTAGYGRNSGTNVPPTSSYTTSNGGYDGAFADLYGGA
SVYGDTTWRTSTSERDGSGSFGYGLGSATSDVSGKSSPGYVGGYSVNKRQSNRGKTCY
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaatggtaagctatttattggtgggatatcttgggacaccaatgaggagcgt
ctcaaggaatattttagtagttttggtgaagtggtagaggcagtgatcatgaaggatagg
accacaggccgtgcccgtggttttggttttgttgtcttctctgacccggctgttgctgag
agagtcatcaaggagaaacacaacattgatggcaggatggttgaggcaaagaaggcagtt
cctcgggatgaccagaacattatgggtagaagcactagcagcatccatgctttgcctggt
ccaggccgcacacgaaagatttttgtaggaggtttagcatctacagtcacagagagtgac
tttaagaagtattttgatcagtttgggaacatcacagatgttgtggtgatgtatgatcac
aacacgcaaaggcctaggggctttggtttcatcacttatgattcagaagaggcagtggac
agagtgttgctaaaaaatttccatgaactgaacggtaaaatggttgaggtcaaacgagca
gttcccaaagagttatcacctggtcctagtcgtagcccacttggtggatataactatggt
ctgaatagggtcaacagctttcttaatggttacactcagggatatactccaagcagtgtt
ggaggctatggacttaggatggatggtaggttcagccctgttgctggtggtcgaagcggg
tttcctccttttggttctggttatggaatgggcgtgaactttgagccagggttgaaccca
agttttggaaatactgcaaattttagtagtaatatcagctatggacgggggttgggccct
tactatattggtaatacaaatagattcggtagtcctattgggtatgatgcaagtagtgga
ggtaattcttcctttttcagctctgtgacccggaatctttggggaactggggggcttaat
tataacacaaatgctgctagttccagtgcatatatgggatctggaagtgggagtatcgga
ggaagtgcctttggaagcagtggaattagttggggttcttctgcaatttccggtcaaggt
ggaggaaataatgttcctagcaatagtgttaattttggctatggaagtggtgatagcagc
tttgggttgggaacagcagggtatggaagaaacagtgggacaaatgtgccaccaacatca
tcatacacaacatcaaatggtggttatgatggagcctttgcagacctttatggtggtgct
tcagtttatggtgacaccacgtggcgaacatcaacgtctgagcgagatggttctggttcc
tttggctatggacttggtagtgccacttctgatgtttctggtaaaagttctcctggttat
gttggtggttatagcgttaataagagacaatcaaatagaggtaagacttgttactag
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