Theobroma cacao (cacao): 18612445
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Entry
18612445 CDS
T02994
Name
(RefSeq) nuclear pore complex protein NUP133
KO
K14300
nuclear pore complex protein Nup133
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
18612445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18612445
03036 Chromosome and associated proteins [BR:
tcc03036
]
18612445
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
18612445
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
18612445
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
DUF2779
Motif
Other DBs
NCBI-GeneID:
18612445
NCBI-ProteinID:
XP_007049309
LinkDB
All DBs
Position
1:complement(13021375..13030147)
Genome browser
AA seq
1329 aa
AA seq
DB search
MFSPGLKRSKLSSRKERNLGQNLATPDSPVTPYTVNRKSAHETSIPDRPNTGTPAPWAPR
LSVLARIPPANKNEKGDELDPIKPVFVGEFPQVVHDEQTSFLRKCLPADVCISGGMEKGT
CLSWIICGNKIFIWSYLSSAASKKCITLELPSDVLENADVGRNSYHCNNWLLTVVNWNST
SKGTNKVPKDCYSAGIVLCNQKTRAVVYWSDIFADVGNAPVTSFASSDESLVTSSPIDGN
NTTSRQQQRSRHGMSFIGSSSFNSLIASAIPGTQHVCVALACSSSGELWQFYCSPSGIQC
DKVYQNIQNSQGTGIGQLVGSKGYPRSMIWRLRYFSVSDHNRQFLLLTDREIQCFNIKLC
PDIEVSKLWSQEIVGNDGDLGIKKDLAGQKRIWPLDLQVDDPGKVITVLVATFCKDRVSS
SSYTQYSLLTMQYKSGVRVSISSDVHERVLEKKAPIQVIIPKARVEDEDFLFSMRLQVGG
KPSGSTIILSGDGTATVSHYYRNSTWLYQFDLPYDAGKVLDASVLPSTDDGEDGAWVVLT
EKAGIWAIPEKAVVLGGVEPPERSLSRKGSSNEGSAQEERRNLMFAGNVAPRRASSDAWD
AGDRQPPVMTGIIRRTAQDEESEALLGQFFHEFLISGKVDGSLEKLKNSGAFERDGETSI
FVRTSKSIVDTLAKHWTTTRGAEIVSLGIISAQLMDKQQKHQKFLQFLALSKCHEELCSG
QRHSLQIILEHGEKLSAIIQLRELQNVISQNRSTGVGSTHLSSETLISGALWDLIQLVGE
RARRNTVLLMDRDNAEVFYSKVSDFDQVFYCLERHLEYIISLEQPVEIQIQRSCELSNAC
VTIFRAAMDYKNEYHLWYPPPEGLTPWYCQLVVRNGLWSIASFMLQLLKETSELDVSAKS
ELYSHLEALTEVLLEVSSGAITAKIERGEEHKGLLNEYWSRRDALLDSLYQQVKGLVEAG
NQDITESIEENNQEILRKLSSSLLSTSKQHEAYQTMWNICCDLNDSGLLRNLMHESVGPR
GGFSYFVFKQLYEKKQFSKLLRLGEEFQEDLSNFLNHHRDLLWLHEVFLHQFSAASETLH
ILALSQEEDSISTTEDETDADHANPVPTLADRRRILNLSMIAAFAGKDPDSQPKVKRIEA
DLKILRLQEEIMEVLPTDDTMQHVEKHLLRPEELIELCLQSSRELALQVFDVFAWTSSSF
RKSHRNLLEECWKNAADQDPWSQLYEASVTEGWSDEETLQQLSQTILFQASNRCYGPKAE
TIEEGFDEVLPLRQENLEAASLNDKRSSVEAILMQHRDFPYAGKLMLTAIMLGCVQDHAK
IEEGLSPVV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaccaggattgaagagaagcaaattaagctcacgaaaggagagaaatctaggc
caaaatctagccacacctgattctcctgttactccatatactgtgaaccgtaaatcagcg
cacgagacttcgattcccgatcgcccaaacactggcactcccgctccttgggctcctcgc
ttgtctgttcttgctagaattccaccagccaacaagaatgagaagggggatgaattagat
ccaattaagccagtgtttgttggagagttcccacaagttgttcatgatgaacagaccagt
tttctgcggaagtgtcttcctgctgatgtttgtatatcgggtggaatggaaaagggaaca
tgcctatcatggattatatgtgggaacaaaatctttatctggagttatttgtcatctgca
gcttcgaagaaatgtattactcttgaacttccttctgatgttttagagaatgcagatgtt
gggagaaattcctatcactgtaataattggttgcttactgttgtcaattggaatagcacc
tcgaaaggaacaaacaaagttccaaaggattgctactctgctggcattgttttgtgtaac
caaaaaactcgagctgttgtatactggtctgacatctttgctgatgtgggaaatgctcct
gttaccagttttgcatcttctgatgaatcattggtgacttcttcacctattgatggcaac
aacaccacaagcaggcagcagcaacgtagtaggcatggaatgagttttattggttcaagt
tctttcaactctttgatcgcttctgcaattcccggtacccaacatgtatgtgttgccctt
gcgtgtagttccagtggtgagctttggcaattttactgcagccccagtggcattcaatgt
gataaagtatatcaaaacatacaaaattcccaaggcactggtattggtcaacttgtagga
agcaagggatatccaaggtcaatgatatggcgtcttcgatacttttctgtttcagaccac
aaccgacaatttctcctactgacagatcgtgaaatacagtgttttaacatcaaactctgt
cctgatatagaagtatcaaagctttggtcacaggaaattgttggtaatgatggtgatttg
ggtattaagaaggatctggctggacaaaaacgaatctggcctctggacctgcaagtggat
gatcctggtaaagtgattactgttcttgttgccaccttctgcaaggaccgggttagcagc
tcaagttacactcaatattctcttttgaccatgcaatataagtctggggtaagggtaagc
atatcctctgatgtacatgaaagggttttagagaaaaaagctccaatccaagtaataatc
ccaaaagcaagggtagaagacgaggacttcttattctccatgagacttcaagttggcggc
aagccctcaggatcgacaatcatattgtctggtgacggaacagcaacagtctcccactat
tatagaaattctacttggctctatcaatttgacttaccttatgatgctggaaaagttcta
gatgcttcggttcttccttctactgatgatggggaagatggtgcatgggttgtgcttact
gagaaagcaggaatatgggcaataccagaaaaggctgttgtacttggtggggttgaaccc
cctgagcgaagcttgtcccgcaaggggagctcaaatgaaggatctgcacaggaagagaga
aggaaccttatgtttgctggcaatgttgctcctagaagggctagttcagatgcatgggat
gctggtgatagacagccacctgttatgactgggattatacgccgaactgcccaagatgaa
gaatcagaagctttactaggtcaatttttccatgagtttttgatatctgggaaggttgat
ggatcactagaaaagctgaagaattctggggcatttgaaagggatggagaaactagtatc
tttgtacgtacaagcaaatcaattgttgacaccttagctaaacactggacaactacaaga
ggtgctgaaattgtttctttgggtattatatctgctcaactcatggataaacagcagaag
catcaaaaatttcttcagtttcttgctttatccaagtgccatgaggagttatgttctgga
cagagacattctttgcaaatcatcttagaacatggtgaaaagctctctgcaattattcaa
ctcagggaactacagaatgtgattagccaaaatcgttcaactggagttggctccacacat
ttaagttctgaaactctaatttcaggtgctctttgggatcttattcagttagttggggag
agggcccggcgaaatactgtccttctgatggacagagataatgctgaagtattctatagc
aaggtatctgattttgatcaggtgttttattgcttagaaagacatctagaatatataatc
agcttggagcagccagttgaaattcagatccaaagatcttgtgaactctcaaatgcatgt
gttaccatatttcgagcggcgatggactacaaaaatgagtatcacctatggtatccacca
ccggagggcttaacaccttggtattgtcaactggtggtgcgtaatgggctgtggagcatt
gcttctttcatgcttcagctgttaaaggaaacatcggaacttgatgtgtcagcaaaatca
gaactatattctcatctagaagcactaactgaagttctacttgaggtgtccagtggtgct
atcactgctaaaatagagcgaggagaagaacacaaaggtcttctaaatgagtactggagt
agaagggatgcacttcttgattccctttatcaacaagttaaaggtttggtagaagctggg
aatcaggacataactgagagcatagaagagaacaatcaagaaatcctaagaaaactatct
tcaagcttgctgtcaacatcaaaacaacatgaagcctaccagaccatgtggaacatatgt
tgtgatctcaatgattcaggattgctcagaaatcttatgcatgagagcgtgggacctaga
ggtggattcagttactttgtgtttaagcagctttatgaaaagaagcaattttctaagcta
ctaaggcttggggaggaattccaggaagatctatctaatttcttaaatcatcatcgggat
ctcctatggcttcatgaagtgtttcttcatcagttttcagcagcttcagaaactcttcat
atattggctctttctcaagaagaggactctatttcaaccactgaagatgagactgatgct
gaccatgcaaatcctgtaccaactttggctgacagaagacgaattttgaacctctccatg
atagctgcctttgcaggtaaggatcctgactctcagccaaaagtgaaacgaatagaagct
gatttgaagattttgagattgcaggaagaaattatggaagttcttcctactgatgacacg
atgcaacatgttgaaaagcatctccttcgtcctgaggagcttattgagctgtgtctgcaa
agtagtagagagctagctttgcaggtttttgatgtatttgcatggactagctcatcgttt
cgcaagagccataggaaccttttggaagagtgctggaagaatgctgctgatcaggatcct
tggagccagctctatgaagcgtctgtaaccgaagggtggagcgacgaggaaaccttgcaa
cagctaagtcaaactatacttttccaggcttcaaataggtgttatggtccgaaagcggaa
accattgaagagggatttgatgaagtgctgccattgagacaagaaaacttagaagcagcc
agtctgaatgataagcgttcatctgtagaagcaatattgatgcaacatagggatttcccg
tatgcaggcaagctaatgctgactgctatcatgctgggttgtgtacaggatcatgccaaa
atagaagagggtctttccccagtggtatga
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