Theobroma cacao (cacao): 18612879
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Entry
18612879 CDS
T02994
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
tcc
Theobroma cacao (cacao)
Pathway
tcc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
18612879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tcc03019
]
18612879
03012 Translation factors [BR:
tcc03012
]
18612879
Messenger RNA biogenesis [BR:
tcc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
18612879
Translation factors [BR:
tcc03012
]
Eukaryotic type
Release factors
18612879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
She2p
Ribosomal_L7Ae
M157_N_1
Motif
Other DBs
NCBI-GeneID:
18612879
NCBI-ProteinID:
XP_007049919
UniProt:
A0A061DPR1
A0AB32VQE9
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All DBs
Position
1:complement(19424754..19428206)
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AA seq
436 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVEILIVWENLDITRYLLKNSITGEIVIKHLNKEQEANQNNFRD
SASSADMEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDELSDDEVYDDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtcacgagaccgataaaaacattgagatatggaagatcaagaagctgatt
aaagcacttgaagctgctagaggcaatggcaccagcatgatatctcttataatgcctcca
cgcgaccaaatatctagggttaccaagatgctgggagatgaatttggaactgcttcaaac
atcaaaagcagagtcaaccgtcaatctgtgttaggtgcaatcacttctgctcagcaaagg
ctcaaactttatagtaaggttcctcccaatgggcttgttctctacacaggaacaattgtt
actgaggatgggaaggagaagaaagtcacaattgattttgagcctttcaggcctataaat
gcatctctctatctttgtgacaacaagtttcacacagaggcactgaatgaacttttggaa
tcagatgacaagtttggttttattgtaatggatggtaatgggactctttttgggacatta
agtggtaacaccagagaggtacttcacaagttcagtgttgatcttccaaagaagcatggg
agaggaggacaatcagcccttcgttttgctcgacttcgaatggaaaagcgccacaattat
gtgaggaagactgctgagcttgccacacagttttttatcaatcctgccaccagccagcct
aatgtttctggattaatactggctggatcagctgatttcaaaactgaactgagtcaatca
gatatgtttgatcagcggcttcaggctaagattctgaatgtggttgatgtctcttatgga
ggagagaatggtttcaaccaggcaattgagctttcctcagaaatcctgtcgaatgtgaaa
ttcatacaggagaagcgcttaattgggaaatactttgaggagattagtcaagatacaggg
aagtatgtttttggtgtggatgacacattgaaggccttggagatgggagctgttgagata
cttattgtgtgggaaaatctggacatcactaggtatttgctgaagaacagcattactggt
gaaattgttataaaacatttgaacaaggagcaggaagctaatcagaacaacttccgtgat
tcagctagctctgctgatatggaggttcaggagaagatgccgcttttagagtggtttgct
aatgaatacaagcggtttggttgtagtcttgagtttgtcaccaacaaatcacaggagggt
tctcagttctgcaggggttttggtgggattggaggcatccttcgttaccagcttgacatg
agatcatttgatgagctttctgatgatgaagtctatgatgattctgaatag
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