Theobroma cacao (cacao): 18612907
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Entry
18612907 CDS
T02994
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18612907
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tcc04812
]
18612907
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
18612907
Cytoskeleton proteins [BR:
tcc04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
18612907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Adaptin_N
Cnd1
INTS1_R4
PDS5
HEAT_Maestro
MMS19_C
TPR_TTI1_C
UTP20
HEAT_DAAF5
V-ATPase_H_N
Rif1_N
Dopey_N
DUF7217
SPO22
Motif
Other DBs
NCBI-GeneID:
18612907
NCBI-ProteinID:
XP_017982212
UniProt:
A0A061DMS3
A0AB32WXA7
LinkDB
All DBs
Position
1:complement(20919767..20933706)
Genome browser
AA seq
1442 aa
AA seq
DB search
MEEALELARAKDTKERMAAVERLYQLLEGSRKSLTSSEVTSLVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWTHKSWRVREEFARTVTSAISLFASTELPLQRAILPPILQMLNDSNPGVREAAI
LCIEEMYTQAGTQFRDELHRHQLPASMVRDINARLEKIEPQVRSSDGMLSGFGAGEIKPA
ILNPKKSSPRAKSSSSSRETSLFGGESDITEKPIDPIKVYSDKELIREFEKIASTLVPEK
DWSIRIAAMQRVEGLVSGGATDYPCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLSFLS
KELLGDFEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIADCAKND
RSSVLRARCVEYALLILEHWPDAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFT
KTWPDRSRRLFSFFDPVIQRIINEEDGGMHRRHASPSLRDRNIQMPFSSQTSAPSNLPGY
GTSAIVAMDRTSSLSSGTSLSSGLILSQSKPLGKGAERTLESVLHASKQKVSAIESMLRG
LDISEKQRSSSLDLGVDPPSSRDPPFPATVPASNSLTSSLGVESTTSSVGKGSNRNGGMI
MSDIITQIQASKDSGKLSYRSSVATESLPAFPLYSAKRASERQERGSVEENSDIREARRF
INPHVDRQYLDTPYRDVNTKDSQNNYIPNFQRPLLRKHVAGRMSAGRRKSFDDSQLSLGE
MSNYVEGPASLSDALSEGLSPSSDWCARVAAFTYLRSLLQQGPKGIQEVVQNFEKVMKLF
FQHLDDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTL
EIVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMSSEGSGNIGILKLWL
AKLMPLVHDKNTKLKDAAISCIISVYSHFDPTAVLNFILSLSVEEQNSLRRALKQYTPRI
EVDLINYLQNKKERQRAKSSYDPSDVVGTSSEEGYIGVSKKSLLLGRYSAGSLDSEGGRK
WGSTQDSTLIASSIGQATSDETQENLYQNFESSANADALPLKTKELSYIVNSGQSLGSRT
GRVENFESGVNLESLSTPRLEMNGLSRSDSLGAIEGLGHNNETSSDLDLNHLKPAAVKVS
SMPDTGPSIPQILHLICNGNDESPTASKRSALQQLIEISLANDFSIWNKYFNQILTAVLE
VVDDSDSSIRELALSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDIVPKVSSEAEHCLNT
VLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMVQLPSFLPALFEAF
GNQSADVRKTVVFCLVDIYIMLGKAFLPHLEGLNSTQLRLVTIYANRISQARTGTPIDAN
HD
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcactggagctggcacgtgccaaagacaccaaggagcgaatggcggcggtg
gagcggctctatcaactcctcgaaggttctagaaagagcctcacttcttcggaagtcact
tcgcttgtcgattgctgcctggatctcctcaaggacaacaacttcagagtctctcagggc
gctctccaggctcttgcttccgccgccgtcctctccggtgatcacttgaagttgcatttc
aacgcgctcgttcccgcggttgttgaacggttaggtgacgccaaacagcccgttagagac
gccgccagacgcctactgctcactctcatggaggtttcttctccaacaattattgttgaa
agagctggctcttatgcctggacgcataaaagttggagagttcgggaagaatttgcacgt
acagtcacatcggcaatcagtctttttgcatctactgaacttccacttcaacgggctatt
cttccacctattttgcagatgctgaatgattcaaatcctggtgttcgtgaagcagctata
ttgtgcattgaggaaatgtatacgcaggctggaactcagttccgtgatgaacttcatcgc
catcagcttcctgcatctatggtgagagatattaatgctagattagagaaaattgagcca
caagttcgatcttcagatggaatgttgagtggttttggtgctggagagataaagcctgca
atccttaaccccaagaaaagcagtccaagagccaagagttcgagttcttcaagggagaca
tctctttttggaggtgaaagtgatatcacagaaaaacccatagatccaattaaagtttac
tcagataaggaactaataagggaatttgagaaaattgcttctacccttgtgccagaaaaa
gattggtccatacgcattgctgccatgcagagagttgaaggccttgtttctggaggtgct
accgattatccatgtttccggggactcctgaagcagcttgttggcccgctaagtacacaa
ttatcggatagaaggtcaagcatagtgaagcaggcttgccatttattatccttcttatca
aaggagctcttgggagattttgaggcatgtgccgagatgttcatcccagtccttttcaag
ttggttgtgattactgtgcttgtaattgcagagtccgcagataactgcataaaaacgatg
ttgcgtaactgcaaagctgcccgtgtgcttccccgcatagctgattgtgcgaagaatgac
cgtagttctgtactccgtgctaggtgtgtcgagtacgcgttgttgatacttgaacattgg
ccagatgcaccagaaatacagcgatcggctgatttatatgaggaccttattaggtgttgc
gttgcagatgcaatgagtgaggtacgatcaactgctagaatgtgctacagaatgttcacc
aaaacttggccagatcgttctcgtcgcttgttctcattctttgatcctgtcattcaaagg
ataattaacgaagaagatggagggatgcataggcggcatgcttctccttctctccgtgac
agaaatatacagatgccattttcctctcaaacttctgctccttcaaatcttcctggatat
ggaacgtctgctatagttgcaatggacagaacttcaagtttatcctcagggacttctctc
tcttctggtttgattctatcccagtcaaagccccttgggaaaggtgctgaacgtactctg
gagagtgtgttgcatgcaagcaaacagaaagtcagtgccattgaaagtatgcttagagga
ctggacatatctgaaaaacagaggtcatcaagtttggatctaggagttgaccctccatca
tctcgtgatccaccattccctgctactgttccagcttctaatagtctcacaagctcttta
ggagtagaatcaactacctctagtgttggtaaaggtagtaaccgcaatggtggtatgatt
atgtctgacatcattactcaaattcaagcttccaaagattcaggcaagttatcatataga
agtagtgtggcaactgagtctttgccagctttcccattatactctgccaaaagggcatct
gaaagacaagagcgaggttctgttgaagagaacagtgacattagggaggctaggcggttt
ataaatccacatgttgacagacaatatttggacacaccttatagagatgtaaacactaag
gattcacagaacaattatattccaaacttccagaggccacttttgagaaaacatgtagct
gggcggatgtctgcaggaaggagaaagagttttgatgatagccagctgtcacttggagag
atgtcaaattatgttgaaggtcctgcttctctcagtgatgccctcagtgaggggctcagt
cctagttctgattggtgtgctagggttgctgcttttacttatctccggtctttgctgcag
cagggaccaaaaggtattcaggaagtggttcagaattttgagaaggtaatgaaactgttt
ttccagcacttggatgatccccaccataaagttgcacaggctgccctttcaactcttgca
gatattattccatcatgtcgaaagccctttgagagttacatggaaagaatcttaccccat
gttttttcacggttaattgatccaaaggagttggttaggcaaccttgctcaacgactttg
gaaattgttagcaaaacttatagcatagattctctcttacctgctttgctgcgttcatta
gatgaacagcgatcaccaaaggcaaagttggctgttattgagtttgctattagttccttc
aacaagcatgctatgagttctgaaggttctggtaatattggcatcctgaagttatggctt
gctaaattgatgccattggtccatgacaaaaatactaagcttaaggatgcagctatttct
tgcattatatctgtctactcacactttgatccgactgcagttctgaattttattcttagt
ttatcagttgaagaacaaaattcattgagacgggcacttaaacagtacactcctcgtatt
gaggtggacctaataaactatttgcagaacaagaaagaaaggcagcgtgctaagtcttcc
tatgatccatctgatgttgttggaacatcatctgaagaaggatatattggtgtgtccaag
aagagtcttttacttggaaggtattctgctggttcccttgatagtgaaggtggtaggaag
tggggttccacccaggattcaaccctgatcgcaagcagtattggccaggcaacatctgat
gaaactcaggagaacttatatcagaactttgagtccagtgcaaatgcagatgctcttcct
ttgaaaaccaaagaattgtcctacattgttaattcgggtcagagcttgggatctcgaact
ggccgggtggagaactttgaaagcggtgttaacctggaaagtctatctactccacgtttg
gaaatgaatggtctgagtagatctgactctttgggggccattgaagggcttggacataat
aatgagacttcatctgacttggatcttaatcatcttaaacctgcagctgtaaaggttagc
tctatgccagacactgggcctagcattcctcaaattcttcacctgatctgcaatgggaat
gatgagagccctactgcaagtaagcgcagtgcacttcagcaattaattgaaatttctctg
gctaatgatttctccatttggaacaagtacttcaatcagattttgacagctgtacttgaa
gttgtagatgattctgattcctcaatccgagaacttgccttatcattgatagttgaaatg
cttaaaaaccagaaagatgctatggaagattctgttgaaatagtgattgagaagctgctt
catgtaacaaaagatattgttcccaaagtttcaagcgaagctgagcactgcttgaacacc
gtgttgtctcaatatgatccattcagatgtttaagtgttattgtacctttattagtcact
gaagatgagaagactctggttatttgcataaactgtttaacaaagcttgtagggcggcta
tcacaggaggaactaatggttcaattgccctcatttttgcctgctctttttgaagccttt
ggaaaccagagtgcagacgtccggaagacagtcgttttctgtttagtggatatttatata
atgcttgggaaagcatttttgccacacttggaggggcttaacagcacacagttgcggttg
gttacaatttatgcgaatcggatctcacaggccaggactggcacccccatagatgctaac
catgattaa
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