Theobroma cacao (cacao): 18613138
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Entry
18613138 CDS
T02994
Name
(RefSeq) structural maintenance of chromosomes protein 1
KO
K06636
structural maintenance of chromosome 1
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18613138
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
18613138
Meiosis-specific proteins
Cohesin complex and associated proteins
18613138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_29
AAA_21
AAA_23
ABC_tran
AAA_15
Laminin_II
SbcC_Walker_B
Mce4_CUP1
EzrA
Motif
Other DBs
NCBI-GeneID:
18613138
NCBI-ProteinID:
XP_007050290
UniProt:
A0AB32VQT2
LinkDB
All DBs
Position
1:27344318..27358012
Genome browser
AA seq
1217 aa
AA seq
DB search
MPSLTSPGKILRLELENFKSYKGLQSIGPFSDFTAIIGPNGAGKSNLMDAISFVLGVRTG
QLRGAQLKDLIYAYDDREKEQRGRRAFVRLVYQLAGGSELCFTRTITPAGISEYRIDGSV
VNWDDYNGKLRSLGILVKARNFLVFQGDVESIASKNPKELTGLLEQISGSEELKRDYEDL
EEQKARAEEKSALIYQRKRTIVMERKQKKEQKEEAEKHFRLQDELKSLKKEHYLWQLLNI
EKDIDKITEELNSEKRNREDVMRELEHFETEAAKKKKEQAKYLKEIAHCEKKISERSIRL
DKSQPELLKLNEEMSRINSKIKSSRKELERKKEERRKHTNDIKELQKGIQDLTAKLEDLN
EKSRDGTGKLPLLDSQLTEYFQIKEDAGMKTAKLRDEKEVLDRQQHADIEAQKNLEENLQ
QLSNREHELEAQEDQMRARLKKILDTSAKQKDELADLKKELREMQDRHQNARSKHENLKS
KIGEIENQLRELKADRYENERDARLSQAVETLKRLFQGVHGRMTDLCRPTQKKYNLAITV
AMGRFMDAVVVEDENTGKECIKYLKEQRLPPQTFIPLQSVRVKPVIERLRTLGGTAKLIF
DVIQFDPALEKAVLFAVGNALVCDDLEEAKVLSWTGERFKVVTVDGILLTKSGTMTGGTS
GGMEARSNKWDDKKIEGLKRKKEQFESELEELGSIREMQLKESETSGRISGLEKKIQYAN
IEKKSIEDKLKNLKQEKQNIKKEIGLITPEFRKLKDLIDKRSTDIRKLEKRINEIVDRLF
KNFSQSVGVANIREYEENQLKAAQNMAEERLSLSNQLAKLKYQLEYEHKRDVESRIKKLE
SSLSSLENDLKLVQKKEAEVKAATEKASDEINRWKEEVKEWKLKSEECEKEIQEWKKQAS
AATTSISKLNRQLNSKETQITQLDERKQEITEKCDLERIELPLISDPMETESSTGKEFDF
SQLNRSLLQDRRPSDREKLEAEFKQKIDALVSEIERTAPNLKALDQYKTLQEKERDVTEE
FEAARKEEKRVADEYNSVKQRRYELFMEAFNHISSNIDRIYKQLTKSGTHPLGGTAYLNL
ENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDA
ALDNLNVAKVAGFIRSKSCDGARASQDSDGGSGFQSIVISLKDSFYDKAEALVGVYRDSE
RSCSRTLTFDLTKYRES
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccctcacttctccaggcaaaatcctccgcttagagcttgagaacttcaagtcc
tacaagggcctccaatctatcggtcccttctccgacttcaccgccattattggaccgaat
ggggccggcaagtctaatctcatggatgcaatcagcttcgttcttggagtccgaacggga
cagctccgtggggcccaactcaaagacctaatttacgcttacgacgaccgcgaaaaagaa
cagcgtggccgacgcgcatttgtgcgattagtttaccaacttgctggtggctccgagctc
tgtttcacccgtaccatcaccccagccggcattagcgagtaccgtatcgacggcagcgtt
gtcaactgggatgactacaatgggaagttaagatcccttggtattcttgttaaggcccgg
aattttcttgtatttcagggtgacgtggagtccattgcttcaaaaaaccccaaagaactt
actgggctgctcgagcagatttcgggttctgaagaactcaagagagattatgaggatctg
gaagagcaaaaagctagagccgaggaaaaatcagcgcttatttatcagagaaagaggaca
atagtgatggagagaaagcaaaagaaagaacagaaggaagaagctgagaaacactttcgc
ttgcaagatgagctgaaatctttgaagaaagaacactacttgtggcaattgcttaacata
gagaaggatattgacaagattactgaggaactcaactctgaaaagaggaaccgtgaagat
gtgatgcgtgagctagaacattttgaaactgaagcagctaaaaagaagaaggagcaggcc
aagtaccttaaagagattgctcattgtgaaaagaagatctctgagagaagcattaggctc
gataaaagtcaacctgagcttctgaaattaaatgaagaaatgtcacgcattaattcaaaa
atcaagagtagccgaaaggagcttgaaagaaaaaaggaagaaaggaggaaacataccaat
gatataaaagaattacagaaaggcatacaagatctgactgcaaaactggaagacttgaac
gaaaaaagtcgagatggtactgggaaactccctttgcttgacagtcaacttactgaatat
ttccaaattaaggaggatgctgggatgaaaactgcaaaattaagagatgagaaggaggtt
ttggataggcagcaacatgctgatattgaagctcaaaaaaatttggaagaaaatcttcaa
caattgagtaatagggagcatgaactggaagcacaggaggaccaaatgcgagctagactg
aagaagattcttgatacctctgctaaacagaaggatgagcttgcagatctgaaaaaggag
ctgcgagaaatgcaagatagacaccagaatgccagatccaagcatgagaatctcaagtct
aaaattggtgaaatagagaatcagttacgtgaactgaaggccgatcgctatgaaaatgaa
agggatgctaggttgtctcaagctgttgagactctgaaacgcctgtttcaaggcgttcat
ggtcgcatgactgatctttgtaggccaactcagaagaagtacaaccttgctatcactgtt
gcaatgggcagatttatggatgcagttgtagtcgaggatgaaaatactggaaaggaatgt
attaagtatttgaaagagcaaaggcttcctcctcagactttcatacctcttcagtcagtg
cgtgttaagccagttattgaaaggttgcgcacgttgggtggcacagcgaagcttatcttt
gatgtgatccaatttgatcctgctttggagaaggcagttctttttgctgttgggaatgct
ttagtttgtgatgatcttgaagaagccaaggttcttagctggaccggagagaggtttaaa
gttgtaactgttgatggaatattactcacaaagtctggcacgatgactggtggtacaagt
ggtggaatggaagcaaggtcaaacaagtgggatgataaaaaaattgaaggtctgaaaaga
aaaaaggaacaatttgaatccgagttggaagagctcggatcaattagagaaatgcagcta
aaagagtctgaaacttctgggagaattagtggacttgaaaagaaaattcagtatgctaac
attgagaagaaaagcattgaagacaagcttaaaaacttgaagcaggagaagcagaatatt
aagaaagagattgggcttataactcctgagtttcggaagttaaaggatttgattgataag
aggagcacagacatcaggaagctggagaagaggattaatgaaatagttgaccgactcttc
aaaaattttagccagtctgtaggtgtggcaaacatccgcgagtacgaagaaaatcaactc
aaggctgcccaaaatatggcagaagagaggcttagcttgagtaaccaacttgcaaagttg
aagtaccagttggaatatgagcataagcgagatgtagaatcgcgaattaaaaagctggaa
tcttctctcagttccttggaaaatgatttaaaactggttcagaaaaaagaggctgaagta
aaggcggcaacagaaaaagcttctgatgaaattaatcggtggaaggaagaagtgaaggag
tggaaattaaagtcagaagagtgtgagaaggaaattcaggaatggaagaagcaggcttct
gcagctacaacaagcatatccaaacttaatcgccaattaaattctaaggagactcagatt
actcaactggatgaacgaaagcaggaaattacagaaaagtgtgacttagagcgtattgag
cttcctctcatttcagacccaatggaaactgaatcttcaacagggaaagagtttgatttt
agtcagttaaatagatctcttctgcaggatagaagaccttctgatcgagagaaacttgag
gcagaattcaaacaaaaaattgatgcgctagtgtcggaaattgaaagaactgctcccaat
ttaaaagcacttgatcaatacaagactcttcaagagaaggaaagagatgtaactgaagag
tttgaagcagccagaaaagaggagaagcgagtagcagatgaatacaattcggttaagcaa
aggagatatgagttgttcatggaagctttcaaccatatttctagtaatatcgataggatt
tacaagcagctaactaaaagtggtacacatccattgggtgggacagcatatttgaactta
gaaaatgaggatgatccttttctgcatggcatcaagtacacagctatgccgccaacaaag
cgcttccgtgatatggaacaactctctggtggagaaaaaactgttgcagcacttgcacta
ctcttctcaatccacagctacaagccttcgcccttcttcatattggatgaagtggatgct
gcattggataatctaaatgttgccaaggtagctggattcatccgttcaaaatcatgtgat
ggagcaagggctagtcaggacagtgatgggggcagcggtttccaaagtattgtgatatca
cttaaagatagcttttatgataaggctgaggctctggttggggtttatcgagattcagag
aggagctgctcgagaactttgacgtttgacttgaccaaataccgggagtcatga
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