KEGG   Theobroma cacao (cacao): 18613242
Entry
18613242          CDS       T02994                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tcc  Theobroma cacao (cacao)
Pathway
tcc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tcc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    18613242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tcc03041]
    18613242
Spliceosome [BR:tcc03041]
 Complex A
  U2 snRNP components
   U2 related factors
    18613242
 Complex B
    18613242
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 18613242
NCBI-ProteinID: XP_017980897
UniProt: A0A061DX52 A0AB32WMM7
LinkDB
Position
1:complement(28843465..28845640)
AA seq 279 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYQRPDMITP
GVDAQGQPIDPHKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFREED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENNCNRGGYCNFMHVKVIGREL
RRKLFGRYRKFRGSRSRSRSASPRHRRDKEFRDRDRDRDRGDYRDRNGRRPDRHDRDSGS
RRKLGSPRRSRSPAPPAREGSEERRARIEQWNREREEKV
NT seq 840 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcctcaatcttcgggaccgagaaggaccgcgtgaattgtcccttc
tatttcaagattggagcgtgccggcacggggacaggtgctcacggcttcacaaccggccg
acgatctcaccaactctcctgctgtcgaacatgtaccagcgcccggacatgatcaccccc
ggagtggacgcccagggccagcctatcgacccccacaagatccaggagcacttcgaggac
ttctacgaggacatcttcgaggagctcagcaagttcggtgagatcgagagcctcaacgtc
tgtgacaaccttgctgaccacatgattggaaacgtgtatgttcagttcagggaggaggac
caggctgcagccgccctccaggcacttcaaggaaggttctactccggtcggcctatcatc
gcggatttctccccagtcactgattttcgcgaggccacttgtcggcaattcgaggagaat
aactgtaaccgcgggggttactgtaattttatgcatgtcaaggtaattgggagggagcta
agaaggaagctgtttgggaggtaccgcaagttcagagggagtcggagcaggagcaggagc
gccagtccacgccacaggcgtgataaggagtttagggaccgggaccgggaccgggaccgt
ggtgattatcgcgatagaaatgggcgaagacctgataggcacgatagggacagcggtagt
aggagaaagcttgggagtcctaggcgaagcagaagtcccgcacctcctgctagagaaggg
agcgaggagcggagagccaggattgaacagtggaatcgagagagggaagagaaggtgtaa

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