Theobroma cacao (cacao): 18613450
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Entry
18613450 CDS
T02994
Name
(RefSeq) sister-chromatid cohesion protein 3
KO
K06671
cohesin complex subunit SA-1/2
Organism
tcc
Theobroma cacao (cacao)
Brite
KEGG Orthology (KO) [BR:
tcc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tcc03036
]
18613450
Chromosome and associated proteins [BR:
tcc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
18613450
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SCD
STAG
PDS5
HEAT
HEAT_2
Cnd1
Glyco_transf_5
Motif
Other DBs
NCBI-GeneID:
18613450
NCBI-ProteinID:
XP_007050749
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Position
1:complement(30396715..30406951)
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AA seq
1145 aa
AA seq
DB search
MDDDAPLASEITTRRYKRARVQPRGAGDEPSKANGNDRENQERSSDASDGSPNPEEREGS
PDDFEEIRPKAKRNRAAEGTSDAPTDERLIEVIKGDGKRIPQAVKCWVERYEKNPKPAMV
ELLMMLFEACGAKYYIKEEFLDETDVDDVVVALVNLARKGEVEDYQSSKRKEFRNFKENL
VSFWDNLVVECQNGPLFDKDLFDKCMDYIIALSCTPPRVYRQVASVMGLQLVTSFISVTK
RLAAQRDTTQRQLNAERKKRADGPRVESLNNRLSATHEQILLMDEMMRKIFTGLFVHRYR
DIDPNIRMSCIQSLGVWILSYPSLFLQDLYLKYLGWTLNDKSAGVRKAAVLALQNLYEVE
DNVPTLSLFTERFSNRMIELADDIDVSVAVCAIGLVKQLLRHQLLPDDDLGPLYDLLIDD
PPEIRRAIGELVYDHLIAQKFNSSQSGSKGNDSEIHLGRMLQILREFSTDAILSIYVIDD
VWEYMKAMKDWKCIISMLLDENPLIELTDEDATNLTRLLFASVRKAVGERIVPASDNRKQ
YFNKAQKEIFENNRRDITVAMMKNYPLLLRKFMADKAKISSLVEIIVYMNLELYSLKRQE
QSFKTVLQLIKDAFFKHGEKDALRSCVKAIKFCSTESRGELQDFARNKLKDLEDELLDKL
KSAIKEVIDGEDEYSLFVNLKRLYELQLSRPVSIESLYGDSITILHSFRNLDDEVVSFLL
LNMYLDVAWSLHSIINSETVTEGSLSSLLSKRDTLLEELEYFLNAPPEVREGGKSGNQLA
CRVCTILADVWCLFRNTNFSPTKLERLGYCPDVSILYKFWRLCELQLNISDETEDEDVNK
EYIEETNRDAVMIAAAKLIASDTVPKDYLAPEIISHFVMHGAGIAEIVKSLITVLRKKDD
DVSVVFLGALKTAYHRHVECTKSDDVSLKSQSFQECKNLAARLAGMFIGAARNKHRPEIL
KIVKEGIEHAFEDAPKQLSFLEASVLHFASRLSLPDIRDILKDVQKRTEYVNTDEDPSGW
RPYNTFYDSLQEKCAKTEGIQDEKELITARRRGRPRKRRNIEGKRLFDEHSSSEEEDSIS
TSDQENAQGEGDKEVEEEEDDAPLIHSLKSSSKLRSLRVSREENRGHSRAGASGRATDNL
AASRM
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgacgcgcctctagcctccgaaattaccactcgccgctataaaagggctagg
gttcaacctcggggagctggagatgaaccgagcaaggcaaacggcaacgatagggagaat
caagaaaggagcagcgatgccagtgatgggagccccaacccagaggagcgggagggttct
cccgatgatttcgaagaaattcgtcctaaagctaagcgaaatcgagctgctgaggggact
tctgatgccccaactgacgagagattaatcgaggttatcaaaggtgatggtaaacgtatt
cctcaagctgttaagtgctgggtggagcgatatgagaagaatccaaaacctgcaatggtt
gaactcttgatgatgctttttgaggcatgcggagcaaagtattatatcaaggaagagttt
ctggatgagactgatgttgatgatgttgtagttgctcttgtcaacctcgctcgaaaaggg
gaagttgaagattaccaaagttcaaaaaggaaggaattcaggaatttcaaggagaatctt
gtttcattctgggacaatttggttgttgagtgccagaatgggccattgttcgataaggat
ttgtttgacaagtgcatggactatataattgcactgtcatgcacccctccaagagtttac
cgtcaagttgcatcagtgatgggtcttcaacttgtcacatctttcatttctgtcacaaaa
aggcttgccgcacagcgtgatactactcagagacagttaaatgctgaaaggaagaaacga
gctgacggacctcgtgtggagtcgctaaataacaggttatcggcaactcatgaacagata
cttctgatggatgagatgatgcgcaaaatcttcactgggttgtttgtgcatcgataccga
gacatcgatcctaatattaggatgtcatgcatacagtctctgggcgtttggattttgtca
tatccttcattgttcttgcaggatctgtacttaaagtatcttggatggacattaaatgac
aaaagtgctggtgtaagaaaagctgctgtccttgcattgcaaaatctctatgaagtggag
gataacgtgccaactcttagtttatttactgaaagattttctaatcggatgattgagctt
gctgatgacattgatgtttctgtggctgtctgcgccatagggcttgtaaaacaattactt
aggcatcagcttttacctgatgatgacttgggtcctttgtatgatctacttattgatgat
ccaccagaaatcaggcgtgccataggagaattagtatatgatcacttaattgctcaaaaa
tttaatagttcccaatcaggctcaaaaggcaatgacagtgagatccatcttggcagaatg
ttgcagatactacgggagttttcaacagatgccattttaagtatatatgttattgatgat
gtctgggagtacatgaaggccatgaaggattggaagtgtatcatctccatgctcttggat
gagaatccattaattgagctaactgatgaagatgcaacaaaccttactagacttctcttt
gcttctgtcagaaaggctgttggagagaggattgttcctgcatctgataatcgcaagcaa
tatttcaataaagctcaaaaagaaatatttgaaaacaacaggcgtgatataactgttgcc
atgatgaagaactaccctttacttctacgtaaattcatggctgacaaggcaaaaatttca
tcattggttgagattattgtgtatatgaaccttgagctttattctctgaagagacaggag
cagagtttcaaaacagttcttcagctcatcaaagatgcatttttcaaacatggtgagaag
gatgcattgagatcttgtgtgaaggctattaaattctgttccactgaaagtcgaggagag
ctgcaagattttgctcgtaacaaactaaaagatcttgaagatgagcttcttgataaactt
aaatctgcaattaaagaagtgattgatggtgaggatgagtattctctttttgtaaattta
aaaagattatatgagcttcaattgtcaaggcctgtatcaattgaaagcttatatggagat
agtatcacaatcttgcatagcttcagaaacttggatgatgaagttgttagttttctgctg
ctcaatatgtacttggatgtggcctggtctttacactccattataaatagtgaaactgtc
actgaaggatccttatcctctctcctgtctaaacgagataccttgttggaggaacttgag
tactttctcaatgcccctccagaagttagggaagggggcaaatctggaaatcaactagcc
tgcagggtgtgtactatactagcagatgtttggtgtctgtttaggaacactaatttttcg
ccaaccaaacttgaaagattaggatattgtccagatgtctctattctttacaagttttgg
aggctttgtgagctacagctcaatatttcagatgagacagaagatgaagatgttaacaaa
gagtatatcgaggagacaaatagagatgcagtcatgattgctgctgcaaagttaattgct
agtgatacagttccaaaggattatcttgctccagagataatttctcattttgtgatgcat
ggagctggcattgcagagattgtaaagagtctgatcacagttctgaggaaaaaagacgat
gatgtctccgtcgtctttctaggagcattgaaaacggcctaccatcgacatgttgaatgt
accaaaagtgatgatgtatccctaaagagccagtcttttcaggaatgtaagaacctggct
gctcggcttgctggaatgttcattggtgctgctcggaacaagcacagaccagagatttta
aagattgttaaggaaggcatcgagcatgcctttgaagatgctccaaaacagctgtctttt
ctggaggcttctgtgcttcattttgcatcaagactttctttgcctgatatccgagacatt
ctgaaggatgtccagaagcggaccgagtatgtaaatacagatgaggatccaagtgggtgg
cgcccctataataccttttatgatagtttgcaagagaagtgtgcaaagactgaagggatt
caagatgagaaggaactgattactgcaagacgtaggggtcgtcctcggaagcggcgaaat
attgaggggaagagactttttgacgagcacagttcaagtgaagaagaggattcaattagc
acatcagaccaagagaatgctcaaggtgagggagataaggaagttgaggaggaagaggat
gatgctcctttgatacattcacttaagtcctcatctaagttgaggtcattacgagtctca
agagaagaaaacagaggccattcaagggctggagcttctggaagagctacagataattta
gctgcttcaaggatgtga
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